Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 8.9e-284 979.5 478 100.0
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.5e-278 961.4 478 97.7
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.2e-275 952.6 478 96.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 4.9e-274 947.2 478 96.2
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 5.4e-273 943.7 480 96.0
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 7.3e-270 933.3 478 94.4
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-265 919.5 478 93.1
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-264 916.0 479 93.5
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.6e-264 915.6 479 93.3
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-264 915.6 479 93.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 2.7e-264 914.8 478 92.5
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 2.7e-264 914.8 478 92.5
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.3e-263 912.5 479 93.3
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.2e-261 906.0 502 88.6
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 4.7e-261 904.0 478 91.4
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 2.7e-248 861.7 502 85.9
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 2.5e-246 855.1 490 86.9
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.1e-230 803.1 478 81.0
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 9.3e-225 783.5 410 92.7
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.5e-219 766.1 484 75.6
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 1.5e-219 766.1 486 75.5
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 2.6e-219 765.4 484 75.6
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.6e-219 765.4 480 75.6
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 3.4e-219 765.0 488 74.2
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 3.4e-219 765.0 484 75.0
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 5.8e-219 764.2 478 75.7
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 1.3e-218 763.1 480 75.8
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.8e-218 761.5 479 75.6
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 5.0e-218 761.1 484 74.8
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-217 759.6 479 75.4
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.5e-217 758.8 491 73.3
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.2e-217 758.4 491 73.5
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 4.2e-217 758.1 486 74.1
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.2e-216 756.5 495 72.3
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.1e-216 755.7 495 72.3
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 2.1e-216 755.7 483 72.3
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 2.1e-216 755.7 479 74.9
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.1e-216 755.7 479 74.9
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 2.1e-216 755.7 480 74.6
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 2.7e-216 755.4 482 73.2
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 3.5e-216 755.0 486 73.5
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 6.1e-216 754.2 482 72.8
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.9e-216 753.8 479 75.2
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.3e-215 753.1 486 73.3
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 1.8e-215 752.7 479 74.5
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.3e-215 752.3 485 74.0
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.3e-215 752.3 485 73.2
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 3.0e-215 751.9 480 73.5
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 3.9e-215 751.5 484 73.6
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.5e-214 749.6 488 74.2
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 1.9e-214 749.2 486 73.0
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 2.5e-214 748.8 483 73.9
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.3e-214 748.4 482 73.4
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 3.3e-214 748.4 483 73.1
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 5.7e-214 747.7 479 72.2
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 7.4e-214 747.3 491 72.3
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 1.6e-213 746.1 483 72.9
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 2.2e-213 745.7 484 72.7
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 2.2e-213 745.7 480 74.8
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 2.2e-213 745.7 478 72.2
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 2.8e-213 745.3 480 74.6
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 3.7e-213 745.0 486 72.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 4.8e-213 744.6 481 74.4
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 4.8e-213 744.6 480 74.0
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 6.3e-213 744.2 479 74.1
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 8.2e-213 743.8 483 72.3
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.8e-212 742.7 509 70.7
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 5.3e-212 741.1 483 73.1
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.2e-211 740.0 483 73.3
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 1.5e-211 739.6 478 73.2
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 4.5e-211 738.0 518 68.0
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 2.9e-210 735.3 479 72.2
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 3.8e-210 734.9 479 71.6
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 5.0e-210 734.6 486 73.5
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 6.5e-210 734.2 497 71.6
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 6.5e-210 734.2 478 71.5
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 8.5e-210 733.8 490 70.6
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.5e-209 732.3 485 70.9
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.5e-209 732.3 479 72.9
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 9.4e-209 730.3 482 71.0
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.2e-208 729.9 468 72.9
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 3.6e-208 728.4 479 71.0
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.0e-207 726.9 479 72.9
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 1.5e-206 723.0 473 72.5
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.3e-206 721.8 459 75.2
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 5.7e-206 721.1 573 62.3
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 4.8e-205 718.0 483 71.2
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 3.1e-204 715.3 572 62.8
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 6.9e-204 714.1 479 71.4
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 9.1e-204 713.8 462 73.4
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 2.6e-203 712.2 488 70.5
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 3.4e-203 711.8 478 69.9
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 4.5e-203 711.4 485 69.7
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 7.7e-203 710.7 487 69.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 5.0e-202 708.0 482 69.9
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 8.5e-202 707.2 490 67.8
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 4.7e-200 701.4 487 69.8
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 2.6e-195 685.6 563 61.8
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.7e-192 675.6 567 60.3
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.3e-191 672.5 540 61.9
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 3.3e-190 668.7 411 76.2
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 4.4e-190 668.3 478 67.6
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.2e-189 666.0 592 57.8
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 3.1e-188 662.1 410 75.9
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 7.0e-188 661.0 479 66.0
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 4.8e-181 638.3 360 88.1
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-179 633.3 332 93.7
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 4.5e-179 631.7 324 94.8
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.8e-172 609.8 447 66.2
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.0e-171 606.3 482 60.4
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.0e-171 606.3 426 67.6
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.9e-165 585.1 374 74.1
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.7e-162 576.6 326 88.7
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 3.9e-162 575.5 483 57.3
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.5e-161 573.5 493 56.0
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.5e-161 573.5 373 72.1
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 7.3e-161 571.2 360 76.1
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 8.0e-160 567.8 373 71.6
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 1.2e-155 553.9 342 75.7
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 7.3e-153 544.7 326 80.4
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.2e-151 538.5 320 79.7
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.9e-148 530.0 327 77.7
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.3e-146 523.9 481 53.4
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 7.8e-139 498.0 327 73.4
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 3.5e-131 472.6 363 65.0
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.1e-130 468.8 296 74.7
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.8e-98 364.0 446 44.2
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.7e-98 362.1 222 76.1
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 8.2e-96 355.1 446 42.6
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 6.1e-91 339.0 211 75.8
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 2.2e-85 320.5 426 42.7
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 3.1e-79 300.1 227 61.2
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.3e-77 294.7 187 74.9
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-73 279.3 159 83.0
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-73 279.3 159 83.0
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.7e-70 270.4 159 81.8
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.6e-65 253.8 145 77.9
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 8.6e-53 212.2 410 32.9
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 4.6e-46 189.9 119 81.5
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-42 177.9 94 88.3
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.0e-42 176.8 93 89.2
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.8e-41 172.9 106 81.1
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 7.5e-41 172.6 106 78.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 7.0e-39 166.0 137 56.9
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.3e-28 129.4 91 68.1
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.6e-19 100.5 93 48.4
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 6.9e-18 96.3 87 55.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.0e-17 94.7 70 62.9
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.8e-16 90.5 65 58.5
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.1e-15 89.0 76 59.2
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.9e-15 88.2 68 63.2
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 2.4e-07 61.2 130 33.1
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 3.5e-06 57.4 34 70.6


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