Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 4.6e-219 764.2 380 100.0
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 2.0e-174 615.9 356 87.1
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 1.1e-167 593.6 354 84.5
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 1.2e-166 590.1 360 81.9
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 1.6e-166 589.7 360 82.5
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 4.9e-160 568.2 360 80.6
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 4.9e-152 541.6 371 73.9
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.3e-149 533.5 355 78.9
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 4.0e-146 521.9 355 77.7
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 3.4e-145 518.8 355 77.2
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 5.8e-145 518.1 361 77.3
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 2.9e-144 515.8 355 75.8
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 1.9e-143 513.1 355 75.2
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 2.7e-134 482.6 349 70.5
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 6.5e-112 408.3 358 58.1
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 2.5e-111 406.4 346 61.0
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 7.9e-110 401.4 346 59.8
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 8.8e-109 397.9 369 55.6
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 4.3e-108 395.6 381 54.3
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 7.4e-108 394.8 340 57.6
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 9.7e-108 394.4 335 59.7
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 9.7e-108 394.4 346 60.4
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 6.3e-107 391.7 355 58.3
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 1.8e-106 390.2 363 54.3
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 5.3e-106 388.7 331 58.0
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 3.4e-105 386.0 372 54.3
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 1.7e-104 383.6 347 55.6
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.2e-104 383.3 348 56.3
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.2e-104 383.3 348 56.3
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.4e-103 380.6 349 56.2
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 1.9e-103 380.2 358 55.6
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.2e-103 379.4 354 55.4
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 3.2e-103 379.4 337 55.2
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.2e-103 379.0 352 55.7
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 1.2e-102 377.5 350 54.6
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 2.1e-102 376.7 326 56.7
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 3.6e-102 375.9 348 54.9
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 4.7e-102 375.6 372 54.0
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 4.7e-102 375.6 343 56.3
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 1.0e-101 374.4 354 54.5
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 2.3e-101 373.2 343 55.7
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 3.0e-101 372.9 345 54.2
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 3.9e-101 372.5 329 55.9
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 3.9e-101 372.5 331 56.2
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 5.1e-101 372.1 346 54.3
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 6.7e-101 371.7 348 54.0
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.5e-100 370.5 354 54.2
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 1.5e-100 370.5 345 53.9
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 2.0e-100 370.2 328 56.4
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 2.6e-100 369.8 346 55.8
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 3.3e-100 369.4 349 54.4
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 4.4e-100 369.0 339 56.9
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 7.4e-100 368.2 329 56.2
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 9.7e-100 367.9 357 54.3
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 9.7e-100 367.9 345 54.2
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 9.7e-100 367.9 337 55.8
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 1.3e-99 367.5 332 56.3
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 2.2e-99 366.7 349 54.4
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 4.8e-99 365.5 338 54.1
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 4.8e-99 365.5 335 55.2
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 1.4e-98 364.0 329 56.5
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 7.0e-98 361.7 344 55.2
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 9.1e-98 361.3 299 61.9
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 1.2e-97 360.9 356 52.5
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.0e-97 360.1 342 55.3
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 2.0e-97 360.1 345 53.9
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 6.5e-96 355.1 321 55.8
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 6.5e-96 355.1 352 52.3
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 4.2e-95 352.4 364 50.8
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 1.6e-94 350.5 325 53.2
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 4.7e-94 349.0 349 51.3
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 6.1e-94 348.6 326 57.7
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 3.0e-93 346.3 364 51.1
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 3.9e-93 345.9 351 50.4
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 1.1e-92 344.4 374 50.3
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 1.5e-92 344.0 336 53.6
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 3.3e-92 342.8 275 60.4
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 1.4e-90 337.4 346 51.2
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 4.1e-90 335.9 413 48.2
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 4.1e-90 335.9 278 62.6
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 9.1e-90 334.7 329 52.6
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 1.0e-88 331.3 337 51.3
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 2.9e-88 329.7 298 56.0
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 8.5e-88 328.2 276 60.9
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 1.5e-84 317.4 342 48.5
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 2.0e-84 317.0 315 51.1
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 2.0e-81 307.0 320 52.5
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 2.8e-75 286.6 273 53.5
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 8.6e-72 275.0 296 52.4
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 1.5e-71 274.2 245 58.0
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 1.5e-71 274.2 328 46.3
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 2.5e-71 273.5 322 46.9
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 8.0e-70 268.5 338 43.8
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 3.4e-68 263.1 270 50.0
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 4.5e-65 252.7 163 78.5
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 5.2e-61 239.2 268 44.4
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 1.5e-60 237.7 212 55.2
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 6.2e-54 215.7 317 38.5
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.7e-51 207.6 269 41.3
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.6e-49 199.5 327 37.3
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 1.1e-45 188.3 215 47.9
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.4e-45 188.0 244 41.4
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 4.9e-43 179.5 358 34.1
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 6.2e-38 162.5 268 35.8
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 1.4e-26 124.8 327 29.4
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 2.1e-25 120.9 104 54.8
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-24 118.2 104 54.8
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.7e-24 115.5 103 53.4
Sabra10G0018700 Salix brachista HOM05D000933 ORTHO05D000820 2.5e-23 114.0 118 50.0
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.3e-21 106.3 98 51.0
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 8.4e-19 99.0 119 42.0
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 8.4e-19 99.0 103 42.7
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 1.5e-15 88.2 105 45.7
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.4e-10 71.6 120 33.3
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 8.7e-08 62.4 60 43.3
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.1e-06 57.8 59 42.4


User provided reference genes

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