Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.2e-146 522.3 273 100.0
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 3.5e-128 461.8 261 93.1
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.8e-124 449.5 262 90.8
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 6.5e-122 441.0 261 88.9
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 3.2e-121 438.7 265 87.9
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.4e-119 433.3 266 85.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-111 406.4 254 83.5
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 8.8e-111 404.1 263 82.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.5e-110 403.3 263 82.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.6e-110 402.5 262 82.4
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 3.3e-110 402.1 251 83.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.4e-110 401.7 251 83.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 9.7e-110 400.6 255 82.7
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.2e-91 340.5 273 66.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.8e-85 319.3 273 68.9
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.7e-83 312.8 253 62.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 3.8e-82 308.9 254 61.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 9.5e-81 304.3 253 60.9
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.6e-80 303.5 271 59.4
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.8e-80 302.8 276 59.1
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 6.1e-80 301.6 277 59.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.0e-79 300.8 257 60.3
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.0e-79 300.8 253 60.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.9e-79 297.7 253 60.1
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.2e-78 297.4 257 59.5
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 2.0e-78 296.6 258 60.1
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 3.4e-78 295.8 248 60.9
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 5.7e-78 295.0 253 59.7
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.7e-78 295.0 253 60.1
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 9.8e-78 294.3 254 60.6
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.3e-77 293.9 261 57.5
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 2.2e-77 293.1 253 59.7
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.8e-77 292.7 257 58.4
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.8e-76 290.0 251 58.6
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.8e-76 290.0 275 56.4
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 9.2e-76 287.7 266 54.9
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 9.2e-76 287.7 257 56.4
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.2e-75 287.3 190 71.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.2e-75 287.3 258 55.4
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 1.2e-75 287.3 270 56.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.6e-75 287.0 258 55.4
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 2.0e-75 286.6 258 55.8
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.7e-75 286.2 245 60.4
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 3.5e-75 285.8 251 59.4
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.3e-74 283.9 248 58.5
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 5.0e-74 282.0 254 57.9
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 5.0e-74 282.0 274 56.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 6.6e-74 281.6 190 71.1
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.5e-73 279.6 254 59.1
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 7.3e-73 278.1 266 55.3
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 9.5e-73 277.7 258 56.2
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.6e-72 276.9 195 69.2
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.1e-72 276.6 195 68.7
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 4.7e-72 275.4 255 54.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 4.7e-72 275.4 267 55.1
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 4.7e-72 275.4 280 53.6
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 6.1e-72 275.0 255 57.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 2.3e-71 273.1 269 55.8
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 4.0e-71 272.3 205 68.3
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.2e-70 270.8 267 52.8
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.3e-69 267.3 251 55.0
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 8.3e-69 264.6 189 66.7
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.1e-68 264.2 266 53.0
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.9e-68 263.5 273 52.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 3.2e-68 262.7 254 55.9
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 7.0e-68 261.5 266 55.3
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 7.8e-67 258.1 289 51.2
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.0e-66 257.7 264 53.8
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 3.9e-66 255.8 193 62.7
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.8e-64 249.6 239 56.5
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 2.3e-63 246.5 301 47.2
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.6e-62 243.0 256 51.2
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.3e-61 240.7 264 50.8
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.2e-61 240.0 270 50.4
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 1.4e-60 237.3 211 54.5
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.0e-58 231.1 263 52.1
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.0e-58 231.1 256 51.2
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.3e-58 230.7 149 71.8
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 5.1e-58 228.8 247 52.2
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.1e-57 227.6 190 61.1
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 5.6e-57 225.3 282 47.9
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 7.3e-57 224.9 355 39.7
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.4e-55 220.7 142 71.1
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 5.2e-55 218.8 221 51.6
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 2.9e-53 213.0 223 54.7
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.9e-52 210.3 241 44.8
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.0e-50 204.5 224 50.0
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 1.5e-49 200.7 257 40.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 6.8e-47 191.8 259 43.2
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 3.0e-42 176.4 250 43.2
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.5e-33 146.7 94 69.1
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 4.0e-31 139.4 170 48.8
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 5.4e-28 129.0 203 34.5
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 9.3e-28 128.3 159 40.9
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 3.5e-27 126.3 117 59.0
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.5e-25 120.9 102 57.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 9.6e-25 118.2 215 33.5
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 9.0e-23 111.7 168 42.9
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 6.5e-21 105.5 117 42.7
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 4.6e-19 99.4 179 39.1
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 7.9e-19 98.6 162 40.7
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 8.7e-18 95.1 130 49.2
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 4.3e-17 92.8 62 66.1
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.8e-16 90.1 90 51.1


User provided reference genes

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