Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.5e-39 164.9 77 100.0
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.6e-33 145.6 77 88.3
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 7.1e-26 120.2 74 71.6
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 5.3e-21 104.0 74 66.2
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 5.9e-20 100.5 73 64.4
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 5.9e-20 100.5 73 64.4
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 5.5e-18 94.0 73 60.3
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 5.5e-18 94.0 73 60.3
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 5.5e-18 94.0 73 60.3
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 1.8e-16 89.0 75 56.0
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 3.9e-16 87.8 75 54.7
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.7e-16 87.0 75 54.7
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.9e-15 85.5 75 53.3
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.9e-15 85.5 75 54.7
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 2.5e-15 85.1 76 56.6
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.3e-15 84.3 73 56.2
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.7e-15 84.0 75 53.3
Thhalv10002869m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 9.7e-15 83.2 74 55.4
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 6.3e-14 80.5 78 59.0
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 6.3e-14 80.5 73 47.9
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 8.2e-14 80.1 76 52.6
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.1e-13 79.7 74 52.7
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 3.1e-13 78.2 74 51.4
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 3.1e-13 78.2 75 50.7
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 4.1e-13 77.8 75 52.0
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.9e-13 77.0 74 51.4
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 9.1e-13 76.6 75 54.7
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 3.4e-12 74.7 74 54.1
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 5.9e-12 73.9 73 54.8
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.7e-11 72.4 73 52.1
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 2.9e-11 71.6 73 53.4
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 3.8e-11 71.2 73 52.1
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 3.8e-11 71.2 73 52.1
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 3.8e-11 71.2 75 48.0
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.5e-11 70.5 75 54.7
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 1.1e-10 69.7 73 50.7
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 1.9e-10 68.9 49 55.1
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 3.2e-10 68.2 74 47.3
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 1.6e-09 65.9 66 45.5
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 2.1e-09 65.5 73 45.2
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.6e-09 64.7 74 43.2
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 4.6e-09 64.3 75 49.3
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 7.9e-09 63.5 73 41.1
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 1.0e-08 63.2 76 48.7
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 1.0e-08 63.2 76 48.7
BcaC09g48311 Brassica carinata HOM05D023045 ORTHO05D024329 3.0e-08 61.6 76 46.1
BolC1t05106H Brassica oleracea HOM05D023045 ORTHO05D024329 3.0e-08 61.6 76 46.1
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.0e-08 61.6 56 46.4
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 5.1e-08 60.8 74 45.9
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 1.1e-07 59.7 71 50.7
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 2.6e-07 58.5 73 38.4
Carub.0007s2967 Capsella rubella HOM05D008462 ORTHO05D010511 4.4e-07 57.8 56 50.0
Gohir.D03G156400 Gossypium hirsutum HOM05D009215 ORTHO05D010851 7.4e-07 57.0 74 44.6
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 1.3e-06 56.2 75 40.0
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 8.2e-06 53.5 73 35.6


User provided reference genes

Program Settings