Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.8e-37 158.7 75 100.0
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 7.7e-25 116.7 78 78.2
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 5.7e-20 100.5 73 67.1
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 4.2e-15 84.3 73 61.6
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 3.4e-12 74.7 75 56.0
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 7.5e-12 73.6 75 53.3
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.2e-11 72.0 75 54.7
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 6.3e-11 70.5 73 50.7
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 1.1e-10 69.7 72 52.8
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.4e-10 69.3 70 48.6
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.8e-10 68.9 75 54.7
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 2.4e-10 68.6 71 49.3
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 2.4e-10 68.6 72 51.4
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.3e-10 67.4 73 50.7
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.2e-09 66.2 69 47.8
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.2e-09 66.2 72 48.6
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.2e-09 66.2 72 48.6
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 2.0e-09 65.5 69 49.3
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 4.5e-09 64.3 69 47.8
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 7.7e-09 63.5 72 45.8
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 1.0e-08 63.2 71 47.9
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 1.0e-08 63.2 71 47.9
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.3e-08 62.8 72 48.6
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.3e-08 62.8 72 48.6
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 1.3e-08 62.8 72 47.2
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 1.3e-08 62.8 72 47.2
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 1.3e-08 62.8 72 47.2
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 1.3e-08 62.8 71 47.9
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.7e-08 62.4 72 47.2
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 3.8e-08 61.2 70 47.1
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.5e-08 60.5 72 47.2
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 6.5e-08 60.5 39 59.0
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 8.5e-08 60.1 39 59.0
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 8.5e-08 60.1 80 43.8
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 1.5e-07 59.3 67 47.8
Sp3g22760 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.5e-07 58.5 58 55.2
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 3.2e-07 58.2 39 56.4
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 4.2e-07 57.8 65 43.1
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 7.2e-07 57.0 75 46.7
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 9.4e-07 56.6 75 50.7
Cpa.g.sc8.114 Carica papaya HOM05D018895 ORTHO05D010851 9.4e-07 56.6 71 43.7
Thhalv10002869m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.2e-06 56.2 72 44.4
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.6e-06 55.8 46 52.2
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 3.6e-06 54.7 75 45.3
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 3.6e-06 54.7 75 45.3
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 6.1e-06 53.9 72 41.7


User provided reference genes

Program Settings