Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G24770 Arabidopsis thaliana HOM05D010094 ORTHO05D009677 3.1e-45 184.9 100 100.0
Thhalv10002739m.g Eutrema salsugineum HOM05D010094 ORTHO05D009677 1.5e-36 156.0 100 85.0
C07p11260 Brassica napus HOM05D010094 ORTHO05D009677 9.9e-36 153.3 100 84.0
BcaB06g26695 Brassica carinata HOM05D010094 ORTHO05D009677 1.3e-35 152.9 100 82.0
A07p07470 Brassica napus HOM05D010094 ORTHO05D009677 1.7e-35 152.5 100 83.0
BraA07t28535Z Brassica rapa HOM05D010094 ORTHO05D009677 1.7e-35 152.5 100 83.0
BcaB03g14566 Brassica carinata HOM05D010094 ORTHO05D009677 1.4e-34 149.4 102 81.4
BcaC06g35752 Brassica carinata HOM05D010094 ORTHO05D009677 2.4e-34 148.7 100 83.0
BolC7t41602H Brassica oleracea HOM05D010094 ORTHO05D009677 2.4e-34 148.7 100 83.0
A03p43930 Brassica napus HOM05D010094 ORTHO05D009677 2.1e-33 145.6 100 80.0
BraA03t13523Z Brassica rapa HOM05D010094 ORTHO05D009677 2.1e-33 145.6 100 80.0
Sp3g22520 Schrenkiella parvula HOM05D010094 ORTHO05D009677 2.1e-33 145.6 101 80.2
C03p54280 Brassica napus HOM05D010094 ORTHO05D009677 5.1e-32 141.0 101 79.2
Carub.0003s2517 Capsella rubella HOM05D010094 ORTHO05D009677 5.1e-32 141.0 101 80.2
BcaC01g03255 Brassica carinata HOM05D010094 ORTHO05D009677 3.3e-31 138.3 100 78.0
BolC3t17714H Brassica oleracea HOM05D010094 ORTHO05D009677 3.3e-31 138.3 100 78.0
AL3G40510 Arabidopsis lyrata HOM05D010094 ORTHO05D009677 3.1e-29 131.7 100 75.0
CARHR101130 Cardamine hirsuta HOM05D010094 ORTHO05D009677 2.6e-28 128.6 101 74.3
THA.LOC104808782 Tarenaya hassleriana HOM05D010094 ORTHO05D009677 2.7e-17 92.0 122 56.6
AT4G13195 Arabidopsis thaliana HOM05D010094 ORTHO05D009677 4.8e-14 81.3 113 50.4
Carub.0007s2950 Capsella rubella HOM05D010094 ORTHO05D009677 1.1e-13 80.1 108 52.8
Thhalv10026616m.g Eutrema salsugineum HOM05D010094 ORTHO05D009677 2.4e-13 79.0 111 50.5
THA.LOC104804606 Tarenaya hassleriana HOM05D010094 ORTHO05D009677 2.0e-12 75.9 126 46.8
AL9U10830 Arabidopsis lyrata HOM05D010094 ORTHO05D009677 1.7e-11 72.8 112 47.3
Aa31LG9G4620 Aethionema arabicum HOM05D008225 ORTHO05D009677 4.2e-10 68.2 104 51.9
Prupe.8G204100 Prunus persica HOM05D008225 ORTHO05D009677 5.5e-10 67.8 89 55.1
Hma1.2p1_1061F.1_g253430 Hydrangea macrophylla HOM05D008225 ORTHO05D009677 1.2e-09 66.6 102 46.1
Potri.012G019400 Populus trichocarpa HOM05D008225 ORTHO05D009677 1.6e-09 66.2 104 45.2
CiPaw.04G106100 Carya illinoinensis HOM05D008225 ORTHO05D009677 1.3e-08 63.2 94 46.8
Potri.002G241300 Populus trichocarpa HOM05D008225 ORTHO05D009677 1.3e-08 63.2 113 46.0
Cfa002561 Carpinus fangiana HOM05D008225 ORTHO05D009677 2.3e-08 62.4 99 45.5
Gohir.A08G194100 Gossypium hirsutum HOM05D008225 ORTHO05D009677 3.0e-08 62.0 90 52.2
Gohir.D08G211900 Gossypium hirsutum HOM05D008225 ORTHO05D009677 3.0e-08 62.0 90 52.2
Gorai.004G225300 Gossypium raimondii HOM05D008225 ORTHO05D009677 3.0e-08 62.0 90 52.2
Duzib211G0631 Durio zibethinus HOM05D008225 ORTHO05D009677 5.7e-07 57.8 99 46.5
CiPaw.03G150800 Carya illinoinensis HOM05D008225 ORTHO05D009677 7.4e-07 57.4 90 47.8
Duzib138G0496 Durio zibethinus HOM05D008225 ORTHO05D009677 9.6e-07 57.0 99 44.4
Gohir.A07G156400 Gossypium hirsutum HOM05D008225 ORTHO05D009677 4.8e-06 54.7 84 51.2


User provided reference genes

Program Settings