Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G24225 Arabidopsis thaliana HOM05D011145 ORTHO05D013146 3.8e-32 141.0 75 100.0
AL3G38960 Arabidopsis lyrata HOM05D011145 ORTHO05D013146 4.8e-27 124.0 76 89.5
Sp3g21690 Schrenkiella parvula HOM05D011145 ORTHO05D013146 1.2e-25 119.4 75 86.7
Thhalv10003030m.g Eutrema salsugineum HOM05D011145 ORTHO05D013146 2.2e-24 115.2 75 84.0
C01p39700 Brassica napus HOM05D011145 ORTHO05D013146 3.6e-22 107.8 76 78.9
A01p31150 Brassica napus HOM05D011145 ORTHO05D013146 8.0e-22 106.7 76 77.6
BraA01t03240Z Brassica rapa HOM05D011145 ORTHO05D013146 8.0e-22 106.7 76 77.6
CARHR099920 Cardamine hirsuta HOM05D011145 ORTHO05D013146 1.8e-21 105.5 76 80.3
BcaB04g20412 Brassica carinata HOM05D011145 ORTHO05D013146 3.0e-21 104.8 75 77.3
BcaC06g35595 Brassica carinata HOM05D011145 ORTHO05D013146 1.3e-19 99.4 76 76.3
C07p13130 Brassica napus HOM05D011145 ORTHO05D013146 1.3e-19 99.4 76 76.3
BolC7t41808H Brassica oleracea HOM05D011145 ORTHO05D013146 1.3e-19 99.4 76 76.3
BolC1t03923H Brassica oleracea HOM05D011145 ORTHO05D013146 2.8e-19 98.2 76 76.3
A07p08420 Brassica napus HOM05D011145 ORTHO05D013146 3.1e-18 94.7 76 73.7
BraA07t28627Z Brassica rapa HOM05D011145 ORTHO05D013146 3.1e-18 94.7 76 73.7
Carub.0003s2427 Capsella rubella HOM05D011145 ORTHO05D013146 3.6e-14 81.3 79 62.0
Aa31LG8G10540 Aethionema arabicum HOM05D011145 ORTHO05D013146 6.1e-14 80.5 86 59.3
THA.LOC109116291 Tarenaya hassleriana HOM05D011145 ORTHO05D013146 2.7e-09 65.1 87 50.6


User provided reference genes

Program Settings