Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.6e-147 526.2 277 100.0
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 5.4e-140 501.1 277 94.6
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.5e-137 493.0 277 93.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.2e-136 490.0 277 91.7
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.6e-134 482.3 277 91.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.2e-133 479.2 277 90.6
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 6.6e-130 467.6 277 86.6
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.1e-128 462.6 273 88.3
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.8e-128 462.2 273 88.6
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 8.0e-128 460.7 273 87.5
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-127 459.1 273 87.9
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-127 459.1 273 87.9
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.2e-115 420.2 275 77.8
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.1e-107 392.9 277 71.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 7.8e-107 391.0 272 72.1
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.7e-106 389.8 270 72.6
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 1.1e-105 387.1 272 71.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.5e-105 386.0 274 70.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 2.1e-104 382.9 273 69.2
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.1e-103 380.6 284 69.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.4e-103 380.2 276 69.6
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 6.8e-103 377.9 270 70.7
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.8e-103 377.9 274 69.0
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 8.9e-103 377.5 273 68.9
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.5e-102 376.7 266 70.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 2.0e-102 376.3 276 67.4
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 2.0e-102 376.3 268 70.9
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.6e-102 375.9 268 70.5
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 4.4e-102 375.2 269 68.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 7.6e-102 374.4 266 70.7
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.3e-101 373.6 272 70.2
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.3e-101 373.6 276 69.6
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.3e-101 373.6 273 66.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.2e-101 372.9 273 67.8
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.2e-101 372.9 274 68.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 6.4e-101 371.3 275 67.3
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.4e-101 370.9 274 68.2
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.1e-100 370.5 275 67.3
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.4e-100 369.4 276 66.3
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.2e-100 369.0 271 67.5
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 4.1e-100 368.6 278 67.3
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.7e-99 365.9 274 67.5
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 7.8e-99 364.4 278 67.3
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.3e-98 363.6 274 66.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.9e-98 362.1 274 65.7
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 5.1e-98 361.7 274 66.4
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 5.1e-98 361.7 272 68.0
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 6.6e-98 361.3 274 65.7
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.1e-97 360.5 274 67.9
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-97 360.5 264 68.2
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 5.6e-97 358.2 269 68.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.2e-96 357.1 273 67.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.2e-96 357.1 276 67.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.2e-96 357.1 277 66.4
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.8e-96 355.9 264 66.7
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.7e-96 355.1 278 66.9
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 8.1e-96 354.4 267 65.9
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.4e-95 353.6 270 66.7
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.8e-95 353.2 278 66.5
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.0e-95 352.1 270 66.3
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 5.2e-95 351.7 272 64.7
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 6.8e-95 351.3 277 66.4
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 8.9e-95 350.9 270 66.3
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.0e-94 349.7 271 66.1
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.6e-94 349.4 277 65.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 4.4e-94 348.6 282 65.6
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 5.8e-94 348.2 278 65.1
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 7.6e-94 347.8 282 64.5
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 9.9e-94 347.4 276 64.9
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.7e-93 346.7 273 63.7
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.7e-93 346.7 276 64.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.9e-93 345.9 268 65.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.2e-91 340.5 321 56.7
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.1e-91 339.7 268 66.4
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.5e-91 339.0 277 63.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.3e-90 337.0 241 73.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.3e-90 336.3 267 63.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.3e-90 336.3 268 63.4
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 3.0e-90 335.9 277 63.2
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.1e-89 334.0 266 65.0
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 4.3e-89 332.0 275 61.8
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 7.3e-89 331.3 243 70.0
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 7.3e-89 331.3 265 62.6
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 4.8e-88 328.6 265 64.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.4e-84 317.0 271 60.1
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.2e-83 313.9 275 57.1
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 6.0e-83 311.6 266 57.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 1.7e-82 310.1 275 60.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.3e-82 309.7 267 60.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 5.1e-82 308.5 267 59.2
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.5e-81 307.0 234 64.1
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.5e-81 307.0 289 56.1
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.4e-79 299.7 240 64.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.4e-79 299.7 225 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.9e-79 298.1 265 56.6
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 6.9e-79 298.1 253 61.7
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 2.9e-77 292.7 224 65.6
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.9e-76 290.0 240 61.7
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 4.3e-73 278.9 388 43.0
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-72 277.3 261 56.3
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.4e-69 264.6 264 53.4
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 4.3e-65 252.3 271 51.3
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 4.1e-63 245.7 236 56.4
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.1e-59 233.4 254 50.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 5.1e-58 228.8 149 77.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.2e-54 217.6 183 64.5
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-52 210.3 220 55.0
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-48 196.4 138 69.6
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 7.7e-46 188.3 215 51.6
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.2e-45 186.8 167 61.7
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 6.5e-45 185.3 129 65.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.9e-38 162.2 132 58.3
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 9.4e-36 154.8 138 59.4
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 8.0e-35 151.8 120 63.3
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 4.8e-32 142.5 146 56.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.0e-25 120.6 214 38.3
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 5.7e-25 119.0 128 55.5
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 2.8e-24 116.7 119 52.9
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 9.5e-20 101.7 248 31.0
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 8.0e-19 98.6 80 61.2
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.6e-17 93.6 80 58.8
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 3.3e-12 76.6 108 44.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 2.9e-08 63.5 43 69.8


User provided reference genes

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