Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 5.2e-299 1030.4 567 100.0
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 2.6e-213 745.7 600 72.2
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 9.1e-187 657.5 623 64.0
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 1.6e-175 620.2 643 59.7
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 3.9e-169 599.0 624 59.6
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 2.4e-155 553.1 623 57.5
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 1.9e-147 526.9 612 55.1
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 1.2e-146 524.2 612 54.9
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 9.0e-142 508.1 635 51.3
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 2.4e-139 500.0 635 51.0
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 2.4e-139 500.0 635 51.0
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 1.6e-135 487.3 582 53.8
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 3.7e-127 459.5 686 47.1
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 4.7e-90 336.3 621 42.2
GSVIVG01031579001 Vitis vinifera HOM05D007138 ORTHO05D009148 7.6e-40 169.5 400 35.2
Ciclev10004866m.g Citrus clementina HOM05D007138 ORTHO05D009148 2.2e-39 167.9 336 38.1
CiPaw.01G114100 Carya illinoinensis HOM05D007138 ORTHO05D009148 1.4e-38 165.2 430 33.7
Atru.chr3.1784 Acer truncatum HOM05D007138 ORTHO05D009148 3.2e-38 164.1 354 36.4
Cpa.g.sc157.22 Carica papaya HOM05D007138 ORTHO05D009148 5.4e-38 163.3 539 30.4
Haze_11677 Corylus avellana HOM05D007138 ORTHO05D009148 6.0e-37 159.8 399 35.1
MD04G1019900 Malus domestica HOM05D007138 ORTHO05D009148 7.8e-37 159.5 366 35.2
Gorai.006G224900 Gossypium raimondii HOM05D007138 ORTHO05D009148 1.7e-36 158.3 418 35.2
Gohir.D09G201200 Gossypium hirsutum HOM05D007138 ORTHO05D009148 2.3e-36 157.9 418 35.2
QL06p027005 Quercus lobata HOM05D007138 ORTHO05D009148 3.9e-36 157.1 361 34.6
Gohir.A09G207700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.1e-35 155.6 413 36.1
FAN12G4162 Fragaria x ananassa HOM05D007138 ORTHO05D009148 2.5e-35 154.5 398 34.4
TAR365G0398 Trochodendron aralioides HOM05D007138 ORTHO05D009148 2.5e-35 154.5 642 29.4
FvH4_4g12980 Fragaria vesca HOM05D007138 ORTHO05D009148 4.3e-35 153.7 395 33.9
TPR.G11960 Trifolium pratense HOM05D000150 ORTHO05D000108 4.3e-35 153.7 319 36.1
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 7.3e-35 152.9 393 34.9
Potri.002G236300 Populus trichocarpa HOM05D007138 ORTHO05D009148 1.2e-34 152.1 412 35.2
Manes.01G054400 Manihot esculenta HOM05D007138 ORTHO05D009148 4.7e-34 150.2 399 35.3
Hma1.2p1_1457F.1_g284650 Hydrangea macrophylla HOM05D007138 ORTHO05D009148 2.4e-33 147.9 415 31.8
Cfa008656 Carpinus fangiana HOM05D007138 ORTHO05D009148 3.1e-33 147.5 377 34.0
Duzib151G0530 Durio zibethinus HOM05D007138 ORTHO05D009148 3.1e-33 147.5 369 35.2
Aqoxy2G03906 Aquilegia oxysepala HOM05D007138 ORTHO05D009148 4.0e-33 147.1 462 31.6
Gohir.A02G017700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 6.8e-33 146.4 710 27.5
FAN07G0102 Fragaria x ananassa HOM05D007138 ORTHO05D009148 1.5e-32 145.2 389 32.9
Sabra02G0180000 Salix brachista HOM05D007138 ORTHO05D009148 1.5e-32 145.2 462 32.0
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 2.0e-32 144.8 756 25.8
CANSAT78G1621 Cannabis sativa HOM05D007138 ORTHO05D009148 2.6e-32 144.4 480 29.6
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 5.8e-32 143.3 749 25.6
SalBow2G0985 Salvia bowleyana HOM05D007138 ORTHO05D009148 1.3e-31 142.1 365 34.0
Dinv27178 Davidia involucrata HOM05D007138 ORTHO05D009148 1.7e-31 141.7 366 35.2
Eucgr.H02635 Eucalyptus grandis HOM05D007138 ORTHO05D009148 2.2e-31 141.4 403 32.5
Ca_18004_v3 Cicer arietinum L. HOM05D007138 ORTHO05D009148 4.9e-31 140.2 322 37.6
PGR083G1257 Punica granatum HOM05D007138 ORTHO05D009148 6.4e-31 139.8 369 32.0
AUR62020894 Chenopodium quinoa HOM05D007138 ORTHO05D009148 1.4e-30 138.7 361 34.6
arahy.Tifrunner.gnm1.ann1.KQUG48 Arachis hypogaea HOM05D007138 ORTHO05D009148 1.9e-30 138.3 336 34.8
ECA233G0560 Erigeron canadensis HOM05D007138 ORTHO05D009148 5.4e-30 136.7 617 25.8
SalBow2G2858 Salvia bowleyana HOM05D007138 ORTHO05D009148 5.4e-30 136.7 365 33.7
Prupe.1G169400 Prunus persica HOM05D007138 ORTHO05D009148 7.1e-30 136.3 360 33.9
arahy.Tifrunner.gnm1.ann1.JT7ZMS Arachis hypogaea HOM05D007138 ORTHO05D009148 1.2e-29 135.6 336 34.8
Lalb_Chr13g0294671 Lupinus albus HOM05D007138 ORTHO05D009148 2.1e-29 134.8 374 34.2
ClCG06G003170 Citrullus lanatus HOM05D007138 ORTHO05D009148 2.7e-29 134.4 370 32.2
Migut.G00946 Erythranthe guttata HOM05D007138 ORTHO05D009148 4.6e-29 133.7 446 28.5
Psat0s4823g0040 Pisum sativum HOM05D007138 ORTHO05D009148 4.6e-29 133.7 326 34.4
RcHm_v2.0_Chr4g0412661 Rosa chinensis HOM05D007138 ORTHO05D009148 4.6e-29 133.7 389 33.4
Lj4g0024791 Lotus japonicus HOM05D007138 ORTHO05D009148 6.0e-29 133.3 200 43.0
Hund25334 Selenicereus undatus HOM05D007138 ORTHO05D009148 7.8e-29 132.9 473 30.0
Lalb_Chr12g0205841 Lupinus albus HOM05D007138 ORTHO05D009148 1.3e-28 132.1 389 33.2
Sed0014888 Sechium edule HOM05D007138 ORTHO05D009148 2.3e-28 131.3 334 33.8
TWI53G1035 Tripterygium wilfordii HOM05D007138 ORTHO05D009148 3.0e-28 131.0 381 30.2
Glyma.05G150500 Glycine max HOM05D007138 ORTHO05D009148 3.9e-28 130.6 127 55.1
Medtr8g083310 Medicago truncatula HOM05D007138 ORTHO05D009148 5.1e-28 130.2 332 33.1
Sopen09g035410 Solanum pennellii HOM05D007138 ORTHO05D009148 5.1e-28 130.2 183 43.2
MSTRG.9782 Avicennia marina HOM05D007138 ORTHO05D009148 6.6e-28 129.8 419 30.5
EL10Ac3g07428 Beta vulgaris HOM05D007138 ORTHO05D009148 6.6e-28 129.8 363 31.7
Lsat_1_v5_gn_6_59601 Lactuca sativa HOM05D007138 ORTHO05D009148 1.1e-27 129.0 476 28.4
Solyc09g092510.3 Solanum lycopersicum HOM05D007138 ORTHO05D009148 1.5e-27 128.6 199 41.2
Nitab4.5_0000037g0170 Nicotiana tabacum HOM05D007138 ORTHO05D009148 1.9e-27 128.3 584 27.9
AUR62018524 Chenopodium quinoa HOM05D007138 ORTHO05D009148 4.3e-27 127.1 359 32.3
Glyma.08G107400 Glycine max HOM05D007138 ORTHO05D009148 4.3e-27 127.1 432 29.4
Sc13g0000510 Simmondsia chinensis HOM05D007138 ORTHO05D009148 4.3e-27 127.1 368 30.4
Nn1g08135 Nelumbo nucifera HOM05D007138 ORTHO05D009148 7.3e-27 126.3 363 35.0
Oeu034315.1 Olea europaea HOM05D007138 ORTHO05D009148 7.3e-27 126.3 362 32.3
PGSC0003DMG400021869 Solanum tuberosum HOM05D007138 ORTHO05D009148 7.3e-27 126.3 132 52.3
MELO3C021153.2 Cucumis melo HOM05D007138 ORTHO05D009148 1.6e-26 125.2 109 59.6
CsaV3_6G009270 Cucumis sativus L. HOM05D007138 ORTHO05D009148 1.6e-26 125.2 411 31.6
unitig_747.g21666 Utricularia gibba HOM05D007138 ORTHO05D009148 2.8e-26 124.4 410 29.0
Phvul.003G291400 Phaseolus vulgaris HOM05D007138 ORTHO05D009148 3.6e-26 124.0 317 37.2
Cc03_g09210 Coffea canephora HOM05D007138 ORTHO05D009148 4.8e-26 123.6 513 28.5
AL7G42290 Arabidopsis lyrata HOM05D007138 ORTHO05D026809 1.8e-25 121.7 281 35.2
VMungo0251G1281 Vigna mungo HOM05D007138 ORTHO05D009148 1.8e-25 121.7 145 49.7
AT4G14120 Arabidopsis thaliana HOM05D007138 ORTHO05D026809 2.0e-24 118.2 384 31.2
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 2.0e-24 118.2 162 42.6
Os01g0101800 Oryza sativa ssp. japonica HOM05D007138 ORTHO05D009148 4.2e-22 110.5 140 46.4
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 2.1e-21 108.2 354 30.2
HanXRQChr02g0058451 Helianthus annuus HOM05D007138 ORTHO05D009148 4.6e-21 107.1 706 23.1
Peaxi162Scf00286g01047 Petunia axillaris HOM05D007138 ORTHO05D009148 1.7e-20 105.1 585 25.8
Zm00001eb334100 Zea mays HOM05D007138 ORTHO05D009148 3.9e-20 104.0 176 40.3
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 6.6e-20 103.2 141 44.7
Oeu056444.1 Olea europaea HOM05D007138 ORTHO05D009148 8.7e-20 102.8 306 28.8
Zm00001eb127090 Zea mays HOM05D007138 ORTHO05D009148 1.5e-19 102.1 288 31.2
Lsat_1_v5_gn_6_58941 Lactuca sativa HOM05D007138 ORTHO05D009148 1.9e-19 101.7 380 27.6
CDE09G0581 Ceratophyllum demersum HOM05D007138 ORTHO05D009148 3.6e-18 97.4 378 32.0
Carub.0007s2830 Capsella rubella HOM05D007138 ORTHO05D026809 1.2e-16 92.4 229 34.1
CARHR220140 Cardamine hirsuta HOM05D007138 ORTHO05D026809 1.2e-16 92.4 281 29.9
Nn1g02395 Nelumbo nucifera HOM05D007138 ORTHO05D009148 1.1e-09 69.3 290 29.0
ATR0561G013 Amborella trichopoda HOM05D007138 ORTHO05D009148 1.4e-09 68.9 113 35.4
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.9e-06 58.5 51 43.1
Ciclev10006158m.g Citrus clementina HOM05D007138 ORTHO05D009148 5.5e-06 57.0 84 42.9


User provided reference genes

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