Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G23715 Arabidopsis thaliana HOM05D020305 ORTHO05D012998 7.2e-52 206.8 96 100.0
AL3G38610 Arabidopsis lyrata HOM05D020305 ORTHO05D012998 2.1e-43 178.7 97 82.5
Carub.0003s2402 Capsella rubella HOM05D020305 ORTHO05D012998 1.2e-30 136.3 99 64.6
AT3G23727 Arabidopsis thaliana HOM05D020305 ORTHO05D012998 3.4e-25 118.2 96 58.3
A05p37610 Brassica napus HOM05D014072 ORTHO05D012998 1.6e-11 72.8 96 43.8
C05p56170 Brassica napus HOM05D014072 ORTHO05D012998 1.6e-11 72.8 98 42.9
CARHR099710 Cardamine hirsuta HOM05D020305 ORTHO05D012998 1.1e-10 70.1 100 43.0
C03p53240 Brassica napus HOM05D014072 ORTHO05D012998 3.1e-10 68.6 95 41.1
Thhalv10002937m.g Eutrema salsugineum HOM05D020305 ORTHO05D012998 3.1e-10 68.6 97 39.2
C03p53230 Brassica napus HOM05D014072 ORTHO05D012998 5.2e-10 67.8 95 41.1
C03p54430 Brassica napus HOM05D014072 ORTHO05D012998 8.4e-08 60.5 97 39.2
BolC3t17729H Brassica oleracea HOM05D014072 ORTHO05D012998 8.4e-08 60.5 97 39.2
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 5.4e-07 57.8 75 41.3
A03p44060 Brassica napus HOM05D014072 ORTHO05D012998 1.6e-06 56.2 97 37.1
BraA03t13536Z Brassica rapa HOM05D014072 ORTHO05D012998 1.6e-06 56.2 97 37.1
AT4G10115 Arabidopsis thaliana HOM05D058223 ORTHO05D012998 4.6e-06 54.7 100 38.0
BolC5t34282H Brassica oleracea HOM05D014072 ORTHO05D012998 7.8e-06 53.9 76 40.8


User provided reference genes

Program Settings