Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G23633 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.2e-59 231.5 111 100.0
Carub.0003s2666 Capsella rubella HOM05D000209 ORTHO05D000129 4.2e-11 71.6 122 37.7
AL3G42570 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.6e-10 68.2 142 34.5
Thhalv10015418m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.4e-08 60.8 90 41.1
Thhalv10021950m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-06 57.0 73 42.5
AT2G04920 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-06 56.6 42 64.3
AL3G42560 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.8e-06 56.2 71 45.1
Thhalv10022006m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.1e-06 55.5 148 31.1
Thhalv10002915m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.1e-06 55.1 86 43.0
Thhalv10015770m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.1e-06 55.1 61 47.5
Carub.0003s2657 Capsella rubella HOM05D000209 ORTHO05D000129 5.3e-06 54.7 73 43.8
AL3G42550 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.9e-06 54.3 42 61.9
Thhalv10021918m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.9e-06 54.3 133 32.3
Thhalv10002867m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-06 53.9 45 53.3


User provided reference genes

Program Settings