Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G22235 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.3e-29 132.5 72 100.0
AT3G22231 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.1e-23 112.8 55 100.0
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 5.0e-21 104.0 73 80.8
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.1e-20 102.8 73 80.8
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 1.2e-19 99.4 73 78.1
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.6e-19 99.0 73 80.8
AL3G36480 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 2.2e-16 88.6 51 82.4
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 4.1e-15 84.3 75 74.7
Carub.0003s2240 Capsella rubella HOM05D002385 ORTHO05D002245 1.0e-13 79.7 52 73.1
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 5.0e-13 77.4 73 67.1
CARHR098140 Cardamine hirsuta HOM05D002385 ORTHO05D002245 5.0e-13 77.4 44 81.8
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 6.5e-13 77.0 75 69.3
AL3G36490 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 3.2e-12 74.7 52 76.9
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 9.4e-12 73.2 63 71.4
CARHR150690 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.2e-11 72.8 45 80.0
Carub.0224s0002 Capsella rubella HOM05D002385 ORTHO05D002245 3.6e-11 71.2 51 74.5
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 6.1e-11 70.5 62 62.9
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 6.1e-11 70.5 62 62.9
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 1.8e-10 68.9 63 71.4
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 1.8e-10 68.9 63 71.4
Carub.0224s0001 Capsella rubella HOM05D002385 ORTHO05D002245 5.1e-10 67.4 53 66.0
BolC9t58393H Brassica oleracea HOM05D002385 ORTHO05D033827 8.8e-10 66.6 62 61.3
C09p55310 Brassica napus HOM05D002385 ORTHO05D002245 2.0e-09 65.5 64 59.4
C09p55320 Brassica napus HOM05D002385 ORTHO05D002245 2.0e-09 65.5 64 59.4
BolC9t58392H Brassica oleracea HOM05D002385 ORTHO05D002245 2.0e-09 65.5 64 59.4
BolC9t58394H Brassica oleracea HOM05D002385 ORTHO05D002245 2.0e-09 65.5 64 59.4
Aa31LG8G8820 Aethionema arabicum HOM05D002385 ORTHO05D002245 3.3e-09 64.7 57 61.4
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 3.3e-09 64.7 53 66.0
BcaB06g26327 Brassica carinata HOM05D002385 ORTHO05D002245 3.3e-09 64.7 51 68.6
AL3G36460 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 4.3e-09 64.3 56 69.6
BcaC04g19478 Brassica carinata HOM05D002385 ORTHO05D002245 7.4e-09 63.5 51 68.6
BcaC04g19479 Brassica carinata HOM05D002385 ORTHO05D002245 7.4e-09 63.5 51 68.6
A10p19200 Brassica napus HOM05D002385 ORTHO05D002245 9.7e-09 63.2 41 75.6
BraA10t43997Z Brassica rapa HOM05D002385 ORTHO05D002245 9.7e-09 63.2 41 75.6
BraA10t43998Z Brassica rapa HOM05D002385 ORTHO05D002245 9.7e-09 63.2 41 75.6
C03p52250 Brassica napus HOM05D002385 ORTHO05D002245 1.7e-08 62.4 43 69.8
BolC1t05607H Brassica oleracea HOM05D002385 ORTHO05D002245 2.2e-08 62.0 62 56.5
BcaB08g37322 Brassica carinata HOM05D002385 ORTHO05D002245 3.7e-08 61.2 51 66.7
BcaC01g03458 Brassica carinata HOM05D002385 ORTHO05D002245 6.3e-08 60.5 51 66.7
BolC3t17506H Brassica oleracea HOM05D002385 ORTHO05D002245 1.1e-07 59.7 36 77.8
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 4.1e-07 57.8 78 52.6
BcaB06g27517 Brassica carinata HOM05D002385 ORTHO05D002245 1.5e-06 55.8 48 58.3
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.5e-06 55.8 61 60.7
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.0e-06 55.5 60 60.0
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 2.6e-06 55.1 74 48.6
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.6e-06 55.1 72 47.2


User provided reference genes

Program Settings