Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 6.3e-211 737.3 392 100.0
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.7e-200 702.6 392 94.9
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 1.6e-198 696.0 394 94.9
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 7.7e-193 677.2 392 91.8
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 9.1e-186 653.7 393 90.3
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 2.7e-185 652.1 391 90.3
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 2.5e-183 645.6 394 89.6
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 2.6e-180 635.6 393 89.3
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 2.6e-180 635.6 393 89.3
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 8.3e-179 630.6 393 89.1
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 6.6e-176 620.9 393 88.0
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 1.5e-175 619.8 393 87.8
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 9.2e-170 600.5 395 82.3
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 6.6e-160 567.8 391 78.3
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 1.7e-139 500.0 376 70.2
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 7.3e-135 484.6 394 66.8
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 7.3e-135 484.6 400 65.8
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 7.3e-135 484.6 372 69.6
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 7.3e-135 484.6 371 70.1
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 9.0e-133 477.6 392 66.8
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 3.4e-132 475.7 399 64.9
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 2.4e-130 469.5 347 72.3
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 4.2e-130 468.8 399 65.9
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 8.7e-128 461.1 363 67.8
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 3.6e-126 455.7 384 63.5
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 6.2e-126 454.9 380 63.7
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 5.3e-125 451.8 376 64.4
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 9.0e-125 451.1 382 64.9
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 2.6e-124 449.5 347 67.4
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 3.4e-124 449.1 331 70.7
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 2.9e-123 446.0 395 61.8
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 3.2e-122 442.6 359 66.0
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 4.2e-122 442.2 336 67.6
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 9.3e-122 441.0 362 65.5
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.2e-121 440.7 367 64.3
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 1.6e-121 440.3 348 65.2
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 2.7e-121 439.5 376 62.8
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 4.6e-121 438.7 355 64.2
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 6.0e-121 438.3 376 62.5
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 1.0e-120 437.6 361 65.7
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 1.0e-120 437.6 336 66.1
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 1.0e-120 437.6 391 61.9
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.3e-120 437.2 393 60.6
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 1.3e-120 437.2 359 65.2
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 3.0e-120 436.0 381 60.6
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 8.7e-120 434.5 357 64.4
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 1.1e-119 434.1 331 67.7
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.5e-119 433.0 368 62.0
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 2.5e-119 433.0 378 60.8
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 7.4e-119 431.4 385 60.8
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 9.6e-119 431.0 384 59.4
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 1.6e-118 430.3 344 65.1
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 3.7e-118 429.1 336 64.6
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 2.4e-117 426.4 307 71.7
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 3.1e-117 426.0 327 67.0
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 3.1e-117 426.0 336 64.9
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.5e-116 423.7 393 58.8
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 2.6e-116 422.9 370 60.8
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 3.4e-116 422.5 343 63.8
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 7.6e-116 421.4 380 61.6
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 2.5e-114 416.4 392 60.2
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 3.2e-114 416.0 372 59.4
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 4.2e-114 415.6 333 65.5
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 5.5e-114 415.2 341 66.3
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 1.2e-113 414.1 370 59.7
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 2.7e-113 412.9 388 58.8
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.6e-113 412.1 407 56.8
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 6.7e-112 408.3 396 59.1
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 7.4e-111 404.8 394 56.9
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 8.2e-110 401.4 311 65.6
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 1.4e-109 400.6 394 56.6
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 2.4e-109 399.8 385 58.4
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 6.9e-109 398.3 394 56.6
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 2.6e-108 396.4 382 57.1
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 3.4e-108 396.0 305 67.9
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 1.3e-107 394.0 335 61.5
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.3e-107 394.0 422 54.7
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 2.9e-107 392.9 364 60.4
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 3.8e-107 392.5 322 63.0
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.9e-106 390.2 329 63.5
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 2.1e-105 386.7 354 59.3
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 6.1e-105 385.2 368 58.4
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 1.1e-103 380.9 346 58.4
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 7.4e-103 378.3 294 66.3
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 8.2e-102 374.8 338 59.8
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 2.9e-99 366.3 288 66.3
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 1.9e-98 363.6 349 59.3
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 2.0e-95 353.6 327 55.7
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.8e-94 349.0 256 69.5
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 1.4e-90 337.4 322 56.2
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 2.7e-89 333.2 360 53.9
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 2.4e-85 320.1 251 66.1
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 7.0e-85 318.5 227 71.4
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 7.0e-85 318.5 332 50.0
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 5.0e-83 312.4 322 55.6
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 6.5e-83 312.0 304 52.0
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 3.6e-81 306.2 307 57.3
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 8.0e-81 305.1 332 49.1
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 2.8e-78 296.6 323 51.1
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 4.8e-78 295.8 279 58.1
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 3.0e-72 276.6 202 69.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.8e-72 275.4 301 47.5
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 2.0e-71 273.9 187 73.3
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 9.8e-71 271.6 302 52.0
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 2.8e-65 253.4 257 52.9
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.4e-64 251.1 271 55.4
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 2.2e-62 243.8 253 56.5
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.8e-61 240.7 179 69.8
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.9e-58 230.7 200 61.5
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 5.6e-58 229.2 227 55.9
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 1.2e-57 228.0 322 40.1
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 2.1e-57 227.3 163 73.6
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 6.6e-51 205.7 341 46.3
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.9e-42 177.6 249 36.9
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 1.2e-41 174.9 267 37.5
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 7.5e-39 165.6 137 60.6
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 3.0e-27 127.1 105 64.8
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 5.1e-27 126.3 119 56.3
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 1.2e-25 121.7 232 39.2
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.1e-24 118.6 84 75.0
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 2.6e-23 114.0 226 38.1
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.3e-22 111.7 84 70.2
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 1.5e-10 71.6 61 57.4
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 9.6e-10 68.9 66 56.1
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 1.2e-07 62.0 46 65.2


User provided reference genes

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