Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G21165 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-40 169.5 81 100.0
CARHR108200 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.1e-08 60.5 37 78.4
Carub.0003s2111 Capsella rubella HOM05D000209 ORTHO05D000129 2.7e-07 58.5 37 78.4
CARHR097030 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-07 58.5 68 50.0
AL3G35120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.5e-07 58.2 34 85.3
Carub.0006s2875 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-07 58.2 34 79.4
AL3G35160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.6e-07 57.8 37 75.7
Carub.0006s2877 Capsella rubella HOM05D000209 ORTHO05D000129 4.6e-07 57.8 34 76.5
AL3G35150 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.0e-07 57.4 34 79.4
Carub.0003s2110 Capsella rubella HOM05D000209 ORTHO05D000129 6.0e-07 57.4 69 47.8
CARHR150060 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.3e-06 56.2 54 57.4
A05p27610 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-06 55.8 60 55.0
A07p09290 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-06 55.8 61 52.5
BraA07t28728Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-06 55.8 61 52.5
Carub.0003s2112 Capsella rubella HOM05D000209 ORTHO05D000129 1.7e-06 55.8 40 72.5
Thhalv10022270m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.7e-06 55.8 34 76.5
AT3G21170 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-06 55.1 34 76.5
AL5G24180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.9e-06 54.7 34 73.5
BolC5t32993H Brassica oleracea HOM05D000209 ORTHO05D000129 3.9e-06 54.7 68 47.1
Carub.0007s3081 Capsella rubella HOM05D000209 ORTHO05D000129 3.9e-06 54.7 34 76.5
CARHR096990 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.1e-06 54.3 35 71.4
AL3G41660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 47.1
AL6G44040 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 48.5
C05p42950 Brassica napus HOM05D000209 ORTHO05D000129 6.6e-06 53.9 60 53.3
BolC5t33025H Brassica oleracea HOM05D000209 ORTHO05D000129 6.6e-06 53.9 60 53.3
Carub.0003s2103 Capsella rubella HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 48.5
Thhalv10006371m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 47.1
Thhalv10022361m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 45.6
AL8G10750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.6e-06 53.5 81 43.2
BcaC05g28226 Brassica carinata HOM05D000209 ORTHO05D000129 8.6e-06 53.5 55 47.3
C05p42940 Brassica napus HOM05D000209 ORTHO05D000129 8.6e-06 53.5 55 47.3
BolC5t33021H Brassica oleracea HOM05D000209 ORTHO05D000129 8.6e-06 53.5 55 47.3


User provided reference genes

Program Settings