Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 9.8e-68 260.0 131 100.0
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 2.3e-53 212.2 131 84.7
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 3.1e-53 211.8 131 84.7
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 5.8e-52 207.6 131 83.2
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 5.8e-52 207.6 131 83.2
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 9.9e-52 206.8 131 84.0
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 1.1e-50 203.4 131 82.4
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 1.1e-50 203.4 131 82.4
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 9.2e-50 200.3 132 81.1
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 2.1e-49 199.1 131 81.7
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 3.5e-49 198.4 131 80.2
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 1.3e-48 196.4 131 80.2
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 1.3e-48 196.4 131 80.2
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 3.9e-48 194.9 131 79.4
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 6.6e-48 194.1 136 80.1
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 1.2e-46 189.9 131 77.9
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 1.8e-45 186.0 131 77.1
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 1.8e-45 186.0 131 77.1
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 1.8e-45 186.0 131 77.1
Aa31LG8G7360 Aethionema arabicum HOM05D010509 ORTHO05D011067 1.2e-28 130.2 132 58.3
Thhalv10022363m.g Eutrema salsugineum HOM05D010509 ORTHO05D011067 1.3e-24 116.7 90 71.1
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 5.1e-16 88.2 195 39.0
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 3.3e-15 85.5 197 40.1
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 4.3e-15 85.1 198 39.4
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 1.3e-14 83.6 191 39.8
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 1.4e-13 80.1 199 38.7
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 6.9e-13 77.8 197 38.6
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 1.7e-11 73.2 180 36.1
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 8.4e-11 70.9 190 38.4
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 8.4e-11 70.9 190 38.4
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 8.4e-11 70.9 190 38.4
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 1.1e-10 70.5 182 37.4
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 4.2e-10 68.6 182 36.3
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 4.2e-10 68.6 182 36.3
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 4.2e-10 68.6 182 36.3
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 2.7e-09 65.9 191 37.7
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 2.7e-09 65.9 191 37.7
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 4.6e-09 65.1 191 36.6
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 4.6e-09 65.1 191 36.6
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 5.7e-07 58.2 197 31.0
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 9.7e-07 57.4 171 31.6
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 2.8e-06 55.8 172 34.9
THA.LOC104816923 Tarenaya hassleriana HOM05D010922 ORTHO05D011067 6.3e-06 54.7 180 32.2
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 8.2e-06 54.3 193 31.1


User provided reference genes

Program Settings