Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G20155 Arabidopsis thaliana HOM05D011200 ORTHO05D013143 5.0e-125 451.1 217 100.0
AL3G33850 Arabidopsis lyrata HOM05D011200 ORTHO05D013143 2.1e-107 392.5 220 86.4
Carub.0003s2007 Capsella rubella HOM05D011200 ORTHO05D013143 4.2e-100 368.2 217 80.6
CARHR095710 Cardamine hirsuta HOM05D011200 ORTHO05D013143 8.3e-72 274.2 225 66.7
BcaB04g20670 Brassica carinata HOM05D011200 ORTHO05D013143 4.1e-63 245.4 238 54.6
Thhalv10022395m.g Eutrema salsugineum HOM05D011200 ORTHO05D013143 3.9e-61 238.8 229 56.3
BcaC04g21844 Brassica carinata HOM05D011200 ORTHO05D013143 1.1e-58 230.7 235 52.8
BolC9t55564H Brassica oleracea HOM05D011200 ORTHO05D013143 1.1e-58 230.7 229 54.6
BraA09t37700Z Brassica rapa HOM05D011200 ORTHO05D013143 6.9e-58 228.0 228 53.9
BolC6t40415H Brassica oleracea HOM05D011200 ORTHO05D013143 3.3e-52 209.1 227 51.1
C09p26730 Brassica napus HOM05D011200 ORTHO05D013143 6.2e-51 204.9 176 58.5
A09p21010 Brassica napus HOM05D011200 ORTHO05D013143 8.1e-51 204.5 178 59.0
BolC1t04370H Brassica oleracea HOM05D011200 ORTHO05D013143 1.2e-49 200.7 227 48.9
Sp3g18160 Schrenkiella parvula HOM05D011200 ORTHO05D013143 1.1e-47 194.1 206 51.5
A01p34650 Brassica napus HOM05D000515 ORTHO05D001911 4.2e-47 192.2 192 52.6
C06p54020 Brassica napus HOM05D011200 ORTHO05D013143 4.2e-47 192.2 179 55.9
Thhalv10022177m.g Eutrema salsugineum HOM05D011200 ORTHO05D013143 4.3e-44 182.2 154 63.6
THA.LOC104807208 Tarenaya hassleriana HOM05D011200 ORTHO05D013143 9.0e-42 174.5 164 50.0
C01p44080 Brassica napus HOM05D000515 ORTHO05D001911 1.6e-38 163.7 210 42.9
BcaC09g48958 Brassica carinata HOM05D000515 ORTHO05D001911 4.6e-38 162.2 228 40.8
Aa31LG8G6960 Aethionema arabicum HOM05D011200 ORTHO05D013143 7.2e-23 111.7 92 55.4
Gohir.A01G086301 Gossypium hirsutum HOM05D009668 ORTHO05D009578 1.2e-09 67.8 162 28.4
Gorai.002G095500 Gossypium raimondii HOM05D009668 ORTHO05D009578 2.0e-09 67.0 161 27.3
Gohir.D01G072500 Gossypium hirsutum HOM05D009668 ORTHO05D009578 2.6e-09 66.6 161 26.7


User provided reference genes

Program Settings