Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 1.5e-253 879.0 426 100.0
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 7.5e-250 866.7 426 97.9
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 1.5e-242 842.4 427 95.8
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 3.7e-241 837.8 426 93.9
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 1.5e-237 825.9 426 93.2
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 7.2e-237 823.5 426 93.4
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 8.0e-228 793.5 428 90.7
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 1.8e-227 792.3 428 90.4
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 3.0e-227 791.6 426 89.7
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 4.0e-227 791.2 428 90.2
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 5.2e-227 790.8 428 90.7
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 2.0e-226 788.9 424 88.9
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 7.5e-226 786.9 424 88.7
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.1e-224 783.1 422 88.2
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 2.0e-223 778.9 426 88.0
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 2.0e-223 778.9 426 88.0
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 2.0e-223 778.9 427 89.0
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 9.5e-221 770.0 427 87.8
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 2.1e-204 715.7 426 81.9
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.8e-203 712.6 423 80.6
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.0e-190 670.2 432 74.1
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 3.9e-190 668.3 414 76.8
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.5e-189 666.4 432 73.4
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 4.3e-189 664.8 432 73.1
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 4.3e-189 664.8 413 76.5
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 2.8e-188 662.1 427 73.3
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.6e-188 661.8 432 72.7
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 6.2e-188 661.0 432 73.4
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 8.1e-188 660.6 432 72.7
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 1.4e-187 659.8 431 72.9
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 4.0e-187 658.3 419 73.7
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 2.0e-186 656.0 412 75.2
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 3.4e-186 655.2 432 71.8
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.7e-185 652.9 414 73.7
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 8.4e-185 650.6 423 73.5
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.4e-184 649.8 427 73.3
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 9.3e-184 647.1 415 73.7
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 2.1e-183 646.0 430 70.2
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 2.7e-183 645.6 415 74.9
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 3.5e-183 645.2 416 72.1
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 1.0e-182 643.7 424 71.5
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 1.8e-182 642.9 434 69.6
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 8.7e-182 640.6 433 72.1
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.5e-181 639.8 427 71.2
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 1.9e-181 639.4 404 74.8
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 2.5e-181 639.0 424 71.9
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 2.5e-181 639.0 421 73.4
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 2.1e-180 636.0 414 71.5
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 8.1e-180 634.0 435 71.0
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 8.1e-180 634.0 428 72.2
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.1e-179 633.6 423 71.9
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.4e-179 632.5 432 70.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.1e-179 632.1 418 70.1
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 4.0e-179 631.7 429 69.7
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 1.2e-178 630.2 431 68.9
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 7.6e-178 627.5 425 69.4
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 7.6e-178 627.5 413 73.4
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.3e-177 626.7 425 71.3
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.9e-177 625.5 425 71.3
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 2.9e-177 625.5 420 71.2
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 4.9e-177 624.8 410 71.0
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 7.1e-176 620.9 429 69.0
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 3.5e-175 618.6 421 71.0
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.6e-175 618.2 419 69.2
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.0e-175 617.8 419 69.2
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 1.3e-174 616.7 416 72.6
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 2.3e-174 615.9 427 67.9
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 8.7e-174 614.0 419 70.2
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 2.5e-173 612.5 422 69.9
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 1.3e-172 610.1 414 70.8
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 1.3e-172 610.1 448 66.7
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 8.2e-172 607.4 426 69.2
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.1e-171 607.1 421 69.8
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 1.8e-171 606.3 429 66.7
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 9.0e-171 604.0 425 67.3
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 1.5e-170 603.2 421 68.6
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 4.5e-170 601.7 415 67.0
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 4.5e-170 601.7 426 67.8
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 5.8e-170 601.3 425 66.4
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 7.6e-170 600.9 428 68.7
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 2.5e-168 595.9 428 67.3
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 4.6e-167 591.7 427 68.1
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 7.9e-167 590.9 423 68.3
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 7.9e-167 590.9 423 68.3
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 2.3e-166 589.3 423 66.0
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 1.9e-165 586.3 426 64.1
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.3e-165 585.5 426 63.8
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 4.3e-165 585.1 436 67.0
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.2e-164 582.8 423 64.8
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.8e-163 579.7 414 65.9
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.5e-162 576.6 414 66.4
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.0e-162 576.2 424 68.6
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 7.6e-162 574.3 397 68.3
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 1.7e-161 573.2 432 65.7
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 6.5e-161 571.2 417 64.7
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.1e-160 570.5 415 66.3
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.4e-160 570.1 414 66.7
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.9e-160 569.7 414 65.7
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.2e-160 568.5 429 64.3
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 4.2e-160 568.5 414 66.2
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 4.6e-159 565.1 417 66.7
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 8.8e-158 560.8 420 63.3
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.4e-155 552.7 429 60.8
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 5.9e-154 548.1 414 64.5
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 5.0e-153 545.0 413 65.6
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 7.2e-152 541.2 425 59.1
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.0e-150 535.8 421 61.3
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 2.6e-149 532.7 416 58.2
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 1.4e-147 526.9 429 57.1
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.2e-146 523.9 416 59.9
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 7.7e-146 521.2 422 59.0
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 7.7e-146 521.2 430 61.2
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 1.3e-145 520.4 357 71.4
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 3.8e-145 518.8 415 60.7
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 4.7e-143 511.9 413 58.1
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.7e-140 502.3 395 59.2
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.0e-137 491.9 449 52.8
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 9.4e-136 487.6 418 55.7
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 8.0e-127 458.0 406 58.1
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 2.5e-120 436.4 310 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.4e-118 430.6 434 49.3
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 3.1e-115 419.5 298 65.8
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.5e-114 416.0 268 72.4
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.1e-110 402.9 426 51.9
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 5.2e-110 402.1 413 47.9
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 2.0e-109 400.2 426 50.9
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.3e-108 397.5 429 45.9
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 2.2e-108 396.7 417 45.6
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.9e-100 369.8 350 49.7
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 7.8e-90 335.1 424 41.0
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 4.3e-88 329.3 256 66.8
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 1.4e-86 324.3 239 65.7
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 3.8e-84 316.2 227 67.4
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.9e-78 295.4 296 47.3
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-61 241.5 146 81.5
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-57 227.6 158 75.3
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 6.7e-57 225.7 161 67.1
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 3.1e-54 216.9 158 67.1
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 4.3e-48 196.4 139 61.9
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.8e-47 193.0 315 35.2
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.5e-43 180.6 132 59.1
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 5.7e-40 169.5 114 68.4
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 2.2e-39 167.5 100 82.0
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.9e-38 162.5 210 45.7
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 5.0e-36 156.4 159 54.1
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.6e-34 151.4 129 64.3
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 1.0e-33 148.7 92 81.5
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-33 147.9 79 89.9
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-32 144.8 78 88.5
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 5.3e-30 136.3 408 24.8
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 2.7e-26 124.0 67 89.6
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.6e-21 108.2 71 71.8
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 4.5e-21 106.7 60 81.7
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 1.5e-19 101.7 62 82.3
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 6.1e-18 96.3 93 53.8
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 7.5e-16 89.4 58 79.3
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.5e-16 89.4 84 50.0
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.2e-15 87.8 68 52.9
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 3.7e-15 87.0 55 80.0
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 3.8e-12 77.0 51 76.5
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.6e-10 70.5 73 46.6
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.4e-09 68.6 57 56.1
C06p51380 Brassica napus HOM05D004203 ORTHO05D004830 2.3e-09 67.8 43 79.1
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 4.0e-09 67.0 37 78.4
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 2.0e-08 64.7 106 34.9
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 4.1e-06 57.0 71 35.2


User provided reference genes

Program Settings