Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 3.9e-128 461.5 230 100.0
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.5e-119 433.0 230 95.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 1.7e-107 392.9 234 87.2
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 8.5e-107 390.6 227 86.3
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 2.1e-105 386.0 228 84.2
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 2.3e-104 382.5 234 83.8
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 5.9e-100 367.9 228 80.7
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 5.9e-100 367.9 228 80.7
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.2e-99 365.9 228 80.3
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.2e-99 365.9 228 80.3
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 1.3e-91 340.1 228 78.1
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 2.3e-64 249.6 226 58.4
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.3e-62 243.8 211 59.2
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.2e-62 243.0 221 55.7
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 6.3e-62 241.5 224 54.9
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.6e-60 236.9 228 55.3
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.0e-60 236.5 186 61.8
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.7e-60 236.1 179 60.9
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.7e-60 236.1 181 62.4
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.3e-59 233.8 181 61.3
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.9e-59 232.6 179 62.0
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 3.9e-59 232.3 196 56.6
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 5.0e-59 231.9 216 56.9
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 9.5e-58 227.6 217 53.9
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.2e-57 227.3 180 60.0
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.6e-57 226.9 221 53.4
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 2.8e-57 226.1 180 59.4
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 3.6e-57 225.7 190 58.9
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 6.1e-57 224.9 180 60.0
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.4e-56 223.8 216 53.2
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 2.3e-56 223.0 193 57.0
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 4.0e-56 222.2 179 61.5
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 2.0e-55 219.9 180 58.3
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.3e-54 217.2 224 51.3
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 2.2e-54 216.5 232 51.7
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 8.3e-54 214.5 224 50.4
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.4e-53 213.8 236 49.6
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.9e-53 213.4 239 50.2
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 7.0e-53 211.5 183 55.2
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 3.5e-52 209.1 185 56.2
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 3.5e-52 209.1 183 54.6
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 1.3e-51 207.2 220 50.5
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 3.9e-51 205.7 175 57.7
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 5.0e-51 205.3 194 53.6
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.3e-50 202.2 189 55.6
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 4.3e-50 202.2 205 52.7
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 9.5e-50 201.1 179 57.0
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.6e-49 199.1 191 56.5
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 6.2e-49 198.4 153 62.7
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.4e-48 197.2 180 54.4
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 4.0e-48 195.7 180 56.7
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 5.8e-47 191.8 222 49.1
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 7.5e-47 191.4 198 52.5
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 2.2e-46 189.9 203 48.3
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 4.9e-46 188.7 265 44.2
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 4.9e-46 188.7 207 51.2
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 7.0e-45 184.9 179 52.5
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 5.1e-43 178.7 140 58.6
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.6e-41 173.7 227 40.5
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 3.6e-41 172.6 180 48.9
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 4.0e-40 169.1 223 44.4
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 2.0e-39 166.8 176 48.3
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 2.0e-39 166.8 199 44.7
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.7e-38 163.7 150 56.7
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.2e-36 157.5 136 58.8
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 2.1e-36 156.8 127 59.1
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 6.0e-36 155.2 152 54.6
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 6.6e-35 151.8 231 40.3
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 3.3e-34 149.4 160 47.5
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.1e-33 146.7 235 37.0
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 2.8e-33 146.4 230 43.0
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 4.0e-32 142.5 131 55.0
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 6.8e-32 141.7 111 59.5
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 8.9e-32 141.4 150 51.3
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.2e-31 141.0 116 58.6
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.5e-31 140.6 201 41.8
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 2.2e-30 136.7 161 46.6
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 3.8e-30 136.0 117 55.6
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.9e-29 133.7 95 65.3
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 4.2e-29 132.5 118 54.2
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 7.1e-29 131.7 115 57.4
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.5e-26 123.2 141 46.1
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 5.6e-26 122.1 112 59.8
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 1.2e-23 114.4 145 43.4
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.9e-21 107.1 228 31.1
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 4.2e-21 105.9 184 35.3
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 5.4e-21 105.5 136 44.1
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 2.3e-19 100.1 77 61.0
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.5e-18 96.7 93 55.9
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.6e-17 92.8 129 40.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.8e-15 85.5 221 29.0
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 9.9e-15 84.7 84 51.2
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.7e-14 84.0 84 51.2
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 1.8e-11 73.9 57 61.4
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 5.8e-07 58.9 113 31.9


User provided reference genes

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