Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 2.1e-142 509.2 303 100.0
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 8.8e-104 380.9 304 77.6
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 5.7e-103 378.3 304 82.6
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 7.5e-103 377.9 302 77.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 3.6e-97 359.0 305 69.8
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.4e-96 357.1 302 71.2
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 9.2e-85 317.8 305 65.9
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 4.6e-84 315.5 304 65.1
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 7.8e-84 314.7 303 65.0
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 3.0e-83 312.8 303 63.7
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.6e-68 263.8 273 60.8
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 2.4e-56 223.4 313 49.5
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.1e-34 151.4 332 38.6
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 6.5e-30 135.6 333 37.8
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 2.5e-29 133.7 331 38.7
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 3.2e-29 133.3 343 37.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 7.1e-29 132.1 336 38.7
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.2e-28 131.3 334 37.4
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.6e-28 129.4 332 37.3
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 6.0e-28 129.0 335 38.2
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 8.7e-27 125.2 335 38.2
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 3.3e-26 123.2 337 34.7
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 6.3e-25 119.0 343 36.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 6.3e-25 119.0 342 37.4
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.1e-24 118.2 341 37.0
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.2e-23 114.8 330 32.7
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.5e-23 114.4 333 37.5
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.6e-23 113.6 335 35.2
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.6e-23 113.6 342 36.5
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 6.5e-22 109.0 338 35.2
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 5.5e-21 105.9 336 36.9
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 9.4e-21 105.1 335 33.7
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.6e-20 104.4 335 35.2
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.1e-20 104.0 331 36.0
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.6e-20 103.2 300 37.0
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 6.1e-20 102.4 351 33.0
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.0e-19 101.7 330 35.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.4e-19 101.3 345 31.9
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.4e-19 101.3 328 33.8
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.8e-19 100.9 341 31.4
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.0e-19 100.1 333 36.3
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.0e-19 100.1 333 36.3
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 5.1e-19 99.4 341 34.9
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.7e-19 99.0 320 34.7
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 8.8e-19 98.6 290 36.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.5e-18 97.1 349 33.2
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 5.7e-18 95.9 335 31.9
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.7e-17 94.4 339 32.2
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 2.8e-17 93.6 340 32.9
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.1e-16 91.7 333 39.9
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.1e-16 91.7 297 34.3
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 1.4e-16 91.3 56 82.1
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.4e-16 91.3 336 32.1
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.4e-16 91.3 337 33.5
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.4e-16 90.5 340 32.4
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 2.4e-16 90.5 340 32.4
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 4.1e-16 89.7 323 33.1
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 5.3e-16 89.4 344 31.4
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.5e-15 87.8 279 33.0
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.0e-14 85.1 291 35.1
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.3e-14 84.7 343 30.9
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 2.9e-14 83.6 306 31.4
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 3.8e-14 83.2 317 30.9
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.1e-13 81.6 307 30.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.9e-13 80.9 305 31.1
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.9e-13 80.9 364 28.8
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.5e-13 80.5 350 35.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 2.5e-13 80.5 334 30.5
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 5.5e-13 79.3 327 32.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.6e-12 77.8 326 29.4
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.6e-12 77.8 246 35.8
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.1e-12 77.4 287 33.4
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 7.9e-12 75.5 332 32.2
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 7.9e-12 75.5 324 30.2
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.3e-11 73.9 290 33.1
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 2.3e-11 73.9 307 30.6
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 6.7e-11 72.4 312 29.8
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.5e-10 71.2 268 32.1
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 4.4e-10 69.7 382 29.1
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 5.7e-10 69.3 320 28.4
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 9.7e-10 68.6 213 33.3
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.3e-09 68.2 315 30.8
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.7e-09 67.8 277 31.8
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 2.8e-09 67.0 308 30.8
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.1e-08 65.1 224 32.1
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.4e-08 64.7 331 28.4
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 5.3e-08 62.8 231 32.0
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.5e-07 61.2 161 41.0
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.4e-07 60.1 143 43.4
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 3.4e-07 60.1 200 35.0
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 5.9e-07 59.3 276 33.3
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 7.7e-07 58.9 144 38.9
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 7.7e-07 58.9 320 26.9
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 1.0e-06 58.5 210 33.8
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 2.9e-06 57.0 212 32.1
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 3.8e-06 56.6 112 38.4
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 3.8e-06 56.6 317 30.3
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 6.5e-06 55.8 305 27.5
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 6.5e-06 55.8 171 36.3
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 6.5e-06 55.8 312 30.4
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 6.5e-06 55.8 319 28.5


User provided reference genes

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