Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 1.7e-59 232.6 136 100.0
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.1e-53 213.4 135 90.4
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 1.6e-44 183.0 134 79.9
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 6.7e-43 177.6 137 81.0
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.9e-42 176.0 136 81.6
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 7.4e-42 174.1 135 80.7
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 1.3e-41 173.3 135 78.5
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 1.3e-41 173.3 135 80.0
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 3.7e-41 171.8 135 77.8
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.2e-39 166.8 135 75.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.9e-29 132.9 122 60.7
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 3.7e-25 118.6 135 61.5
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 2.9e-22 109.0 112 55.4
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 3.8e-22 108.6 110 56.4
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 3.8e-22 108.6 112 57.1
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 5.0e-22 108.2 110 56.4
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 4.6e-20 101.7 111 52.3
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 4.6e-20 101.7 120 39.2
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 7.9e-20 100.9 123 52.8
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 7.9e-20 100.9 112 53.6
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.0e-19 100.5 107 43.9
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.0e-19 100.5 97 45.4
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.0e-19 100.5 101 42.6
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.8e-19 99.8 107 43.9
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.8e-19 99.8 107 43.9
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 2.3e-19 99.4 112 52.7
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.3e-19 99.4 102 58.8
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 3.0e-19 99.0 99 46.5
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 3.9e-19 98.6 103 55.3
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 8.8e-19 97.4 131 48.1
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.1e-18 97.1 124 48.4
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.5e-18 96.7 99 42.4
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 1.5e-18 96.7 118 55.9
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 1.9e-18 96.3 110 42.7
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.9e-18 96.3 137 48.9
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 1.9e-18 96.3 131 44.3
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 3.3e-18 95.5 99 43.4
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.3e-18 95.5 107 54.2
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 5.7e-18 94.7 115 39.1
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 5.7e-18 94.7 99 59.6
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 7.4e-18 94.4 101 50.5
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 7.4e-18 94.4 106 40.6
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 9.7e-18 94.0 137 43.1
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.3e-17 93.6 100 53.0
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.2e-17 92.8 114 44.7
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 2.8e-17 92.4 110 57.3
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 2.8e-17 92.4 106 52.8
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 3.7e-17 92.0 108 47.2
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 4.8e-17 91.7 113 45.1
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 4.8e-17 91.7 113 48.7
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 6.3e-17 91.3 99 43.4
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 6.3e-17 91.3 113 57.5
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 8.2e-17 90.9 114 53.5
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 8.2e-17 90.9 131 35.1
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 8.2e-17 90.9 130 43.8
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.1e-16 90.5 117 57.3
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.4e-16 90.1 104 45.2
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 1.8e-16 89.7 113 38.1
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.8e-16 89.7 118 42.4
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 1.8e-16 89.7 123 54.5
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.4e-16 89.4 174 32.8
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.1e-16 89.0 115 45.2
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.5e-15 86.7 103 55.3
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 2.0e-15 86.3 131 44.3
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 7.7e-15 84.3 131 44.3
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.0e-14 84.0 99 40.4
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 2.2e-14 82.8 91 57.1
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 6.5e-14 81.3 78 44.9
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.1e-13 80.5 134 35.8
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.5e-13 79.3 103 36.9
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 9.4e-13 77.4 99 53.5
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 1.2e-12 77.0 67 68.7
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 2.7e-12 75.9 75 62.7
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 6.1e-12 74.7 130 33.8
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 6.1e-12 74.7 122 44.3
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 1.4e-11 73.6 91 51.6
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 1.5e-10 70.1 83 38.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 2.0e-10 69.7 111 31.5
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 2.6e-10 69.3 93 60.2
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 9.7e-10 67.4 135 46.7
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 2.4e-08 62.8 85 51.8
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.5e-07 60.1 59 45.8
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.6e-07 59.3 93 39.8
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 1.0e-06 57.4 109 46.8


User provided reference genes

Program Settings