Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 9.0e-99 363.6 186 100.0
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 6.2e-84 314.3 188 87.8
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.1e-80 303.5 187 83.4
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.9e-77 292.7 188 81.9
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 2.9e-65 252.3 186 73.1
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.3e-59 231.5 188 66.5
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 9.4e-56 220.7 188 64.9
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 1.4e-54 216.9 187 59.4
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 3.9e-54 215.3 188 62.8
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.6e-53 212.6 171 65.5
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 9.7e-53 210.7 187 57.2
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 1.1e-51 207.2 189 60.8
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 3.1e-51 205.7 188 59.6
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 3.1e-51 205.7 188 59.6
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.5e-50 203.4 185 59.5
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 2.6e-50 202.6 188 59.6
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 2.6e-50 202.6 188 59.6
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 1.0e-49 200.7 188 59.0
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 3.8e-49 198.7 186 58.6
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.8e-46 189.9 189 56.1
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 6.3e-44 181.4 190 56.8
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 7.0e-43 177.9 185 50.3
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 4.5e-42 175.3 185 50.3
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 2.9e-41 172.6 184 52.2
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 3.8e-41 172.2 186 50.5
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 1.1e-40 170.6 186 50.5
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 1.1e-40 170.6 192 54.2
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 1.1e-40 170.6 186 50.0
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 3.2e-40 169.1 190 54.2
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 5.5e-40 168.3 190 53.7
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 9.4e-40 167.5 190 53.7
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 1.0e-38 164.1 190 53.2
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 2.8e-36 156.0 177 49.2
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 8.3e-36 154.5 177 49.2
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.1e-24 117.5 188 39.4
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 7.2e-24 114.8 118 50.0
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 5.7e-21 105.1 188 35.6
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 8.3e-20 101.3 181 39.8
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 9.2e-19 97.8 189 36.0
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 2.7e-18 96.3 181 34.8
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 1.5e-16 90.5 181 35.4
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.9e-16 90.1 96 50.0
AT3G05741 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 8.3e-12 74.7 190 30.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 5.0e-09 65.5 183 29.0
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 7.3e-08 61.6 142 33.1
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 1.6e-07 60.5 143 30.8
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-06 57.8 118 32.2
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.4e-06 57.4 170 27.6
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 2.3e-06 56.6 133 27.1
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 3.1e-06 56.2 133 27.1
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 4.0e-06 55.8 143 31.5
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 8.9e-06 54.7 134 29.1


User provided reference genes

Program Settings