Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17155 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 4.0e-43 177.6 81 100.0
AL3G30150 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 1.0e-35 152.9 81 84.0
AL2G25160 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 2.5e-29 131.7 81 75.3
AL3G35850 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 7.3e-29 130.2 79 74.7
AT3G16895 Arabidopsis thaliana HOM05D008777 ORTHO05D010940 1.3e-25 119.4 84 70.2
Carub.0003s1666 Capsella rubella HOM05D008777 ORTHO05D010940 7.8e-23 110.2 82 68.3
Carub.0007s2959 Capsella rubella HOM05D008777 ORTHO05D010940 1.0e-22 109.8 81 67.9
Carub.0003s1667 Capsella rubella HOM05D008777 ORTHO05D010940 8.0e-20 100.1 81 64.2
AL3G29910 Arabidopsis lyrata HOM05D008777 ORTHO05D010940 6.6e-14 80.5 84 56.0
Carub.0003s1668 Capsella rubella HOM05D008777 ORTHO05D010940 1.9e-13 79.0 85 55.3
Sp1g08900 Schrenkiella parvula HOM05D008777 ORTHO05D010940 3.3e-13 78.2 84 50.0
C09p06090 Brassica napus HOM05D008777 ORTHO05D010940 5.2e-11 70.9 82 45.1
C09p06100 Brassica napus HOM05D008777 ORTHO05D010940 5.2e-11 70.9 82 45.1
C09p06110 Brassica napus HOM05D008777 ORTHO05D010940 5.2e-11 70.9 82 45.1
C09p06130 Brassica napus HOM05D008777 ORTHO05D010940 4.4e-10 67.8 71 50.7
A08p34050 Brassica napus HOM05D008777 ORTHO05D010940 5.8e-10 67.4 82 46.3
C08p13570 Brassica napus HOM05D008777 ORTHO05D010940 5.8e-10 67.4 82 46.3
BolC8t48994H Brassica oleracea HOM05D008777 ORTHO05D010940 5.8e-10 67.4 82 46.3
BolC8t48997H Brassica oleracea HOM05D008777 ORTHO05D010940 5.8e-10 67.4 82 46.3
C06p49280 Brassica napus HOM05D008777 ORTHO05D010940 1.4e-08 62.8 82 45.1
BolC6t39963H Brassica oleracea HOM05D008777 ORTHO05D010940 1.4e-08 62.8 82 45.1
BolC6t39964H Brassica oleracea HOM05D008777 ORTHO05D010940 3.2e-08 61.6 85 44.7
BolC5t29596H Brassica oleracea HOM05D008777 ORTHO05D010940 4.1e-08 61.2 83 45.8
C06p49290 Brassica napus HOM05D008777 ORTHO05D010940 5.4e-08 60.8 85 44.7
C05p08460 Brassica napus HOM05D008777 ORTHO05D010940 7.1e-08 60.5 83 45.8
CARHR030920 Cardamine hirsuta HOM05D012162 ORTHO05D013734 2.1e-07 58.9 87 37.9
CARHR149470 Cardamine hirsuta HOM05D008777 ORTHO05D010940 2.1e-07 58.9 66 50.0
CARHR078720 Cardamine hirsuta HOM05D013515 ORTHO05D015351 6.0e-07 57.4 81 45.7
AT1G32763 Arabidopsis thaliana HOM05D013515 ORTHO05D015351 7.8e-07 57.0 84 45.2
Carub.0001s3329 Capsella rubella HOM05D013515 ORTHO05D015351 1.3e-06 56.2 84 42.9
Carub.0001s3331 Capsella rubella HOM05D013515 ORTHO05D015351 1.3e-06 56.2 84 42.9
Carub.0001s3291 Capsella rubella HOM05D013515 ORTHO05D015351 2.3e-06 55.5 84 42.9
AL3G14560 Arabidopsis lyrata HOM05D013515 ORTHO05D015351 3.9e-06 54.7 81 46.9
A06p06960 Brassica napus HOM05D008777 ORTHO05D010940 6.6e-06 53.9 84 42.9
CARHR078660 Cardamine hirsuta HOM05D008777 ORTHO05D010940 8.6e-06 53.5 82 41.5


User provided reference genes

Program Settings