Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17120 Arabidopsis thaliana HOM05D009836 ORTHO05D012041 4.2e-79 298.5 220 100.0
AL3G30100 Arabidopsis lyrata HOM05D009836 ORTHO05D012041 3.0e-77 292.4 220 98.2
CARHR092370 Cardamine hirsuta HOM05D009836 ORTHO05D012041 5.7e-68 261.5 220 91.4
Carub.0003s1686 Capsella rubella HOM05D009836 ORTHO05D012041 1.2e-62 243.8 222 89.2
Thhalv10021463m.g Eutrema salsugineum HOM05D009836 ORTHO05D012041 2.7e-62 242.7 220 90.0
Sp3g15340 Schrenkiella parvula HOM05D009836 ORTHO05D012041 2.3e-61 239.6 220 88.2
BcaB04g18930 Brassica carinata HOM05D009836 ORTHO05D012041 8.5e-56 221.1 223 83.9
BcaC01g03786 Brassica carinata HOM05D009836 ORTHO05D012041 3.6e-54 215.7 223 78.0
C03p48650 Brassica napus HOM05D009836 ORTHO05D012041 3.6e-54 215.7 223 78.0
A03p40080 Brassica napus HOM05D009836 ORTHO05D012041 7.9e-54 214.5 223 78.5
BolC3t17143H Brassica oleracea HOM05D009836 ORTHO05D012041 1.8e-53 213.4 223 71.3
BraA03t13158Z Brassica rapa HOM05D009836 ORTHO05D012041 1.8e-53 213.4 223 78.0
A01p37180 Brassica napus HOM05D009836 ORTHO05D012041 3.9e-53 212.2 216 80.6
BcaB04g20864 Brassica carinata HOM05D009836 ORTHO05D012041 8.8e-53 211.1 215 80.9
BcaC09g48668 Brassica carinata HOM05D009836 ORTHO05D012041 2.8e-51 206.1 216 80.1
C01p47120 Brassica napus HOM05D009836 ORTHO05D012041 2.8e-51 206.1 216 80.1
BcaC05g28824 Brassica carinata HOM05D009836 ORTHO05D012041 2.4e-50 203.0 223 81.6
C05p49320 Brassica napus HOM05D009836 ORTHO05D012041 2.4e-50 203.0 223 81.6
BolC1t04680H Brassica oleracea HOM05D009836 ORTHO05D012041 2.4e-50 203.0 216 79.2
BraA01t03779Z Brassica rapa HOM05D009836 ORTHO05D012041 1.7e-48 196.8 216 78.2
A05p32620 Brassica napus HOM05D009836 ORTHO05D012041 3.8e-48 195.7 225 80.0
BraA05t22086Z Brassica rapa HOM05D009836 ORTHO05D012041 3.8e-48 195.7 225 80.0
BcaB06g25804 Brassica carinata HOM05D009836 ORTHO05D012041 1.1e-47 194.1 223 76.7
BolC5t33673H Brassica oleracea HOM05D009836 ORTHO05D012041 3.6e-46 189.1 223 76.2
Aa31LG8G4130 Aethionema arabicum HOM05D009836 ORTHO05D012041 7.7e-33 144.8 216 75.5
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 4.1e-10 69.3 87 43.7
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 5.4e-10 68.9 87 44.8
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 7.3e-07 58.5 84 40.5
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 7.3e-07 58.5 93 38.7
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 9.5e-07 58.2 96 37.5
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.1e-06 57.0 86 38.4
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 2.1e-06 57.0 87 39.1
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 6.2e-06 55.5 86 37.2


User provided reference genes

Program Settings