Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G16960 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 3.2e-62 241.5 115 100.0
AL3G29940 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 9.3e-46 186.8 148 63.5
Carub.0003s1671 Capsella rubella HOM05D000256 ORTHO05D000119 9.0e-25 117.1 151 47.7
AL3G29950 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.9e-22 109.4 138 42.0
AT3G16970 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.9e-22 109.4 141 41.1
Thhalv10022192m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 4.6e-21 104.8 134 44.0
A01p37340 Brassica napus HOM05D000256 ORTHO05D000119 7.9e-21 104.0 147 41.5
BraA01t03793Z Brassica rapa HOM05D000256 ORTHO05D000119 7.9e-21 104.0 147 41.5
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 1.3e-18 96.7 128 43.0
BcaC09g48649 Brassica carinata HOM05D000256 ORTHO05D000119 3.7e-18 95.1 147 39.5
C01p47280 Brassica napus HOM05D000256 ORTHO05D000119 3.7e-18 95.1 147 39.5
BolC1t04698H Brassica oleracea HOM05D000256 ORTHO05D000119 3.7e-18 95.1 147 39.5
Carub.0003s1672 Capsella rubella HOM05D000256 ORTHO05D000119 3.7e-18 95.1 136 39.7
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.7e-15 86.3 120 38.3
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 5.0e-15 84.7 134 35.8
Thhalv10022076m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 8.5e-15 84.0 148 36.5
C05p49350 Brassica napus HOM05D014510 ORTHO05D000119 3.2e-14 82.0 68 51.5
BcaB06g25801 Brassica carinata HOM05D000256 ORTHO05D000119 9.4e-14 80.5 120 34.2
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 1.6e-13 79.7 116 35.3
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 2.7e-13 79.0 142 34.5
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 7.9e-13 77.4 148 32.4
A08p12430 Brassica napus HOM05D000256 ORTHO05D000119 1.0e-12 77.0 138 34.1
BraA08t33213Z Brassica rapa HOM05D000256 ORTHO05D000119 1.0e-12 77.0 138 34.1
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.4e-12 76.6 147 34.0
BcaC09g48660 Brassica carinata HOM05D000256 ORTHO05D000119 1.4e-12 76.6 147 32.7
BolC1t04690H Brassica oleracea HOM05D000256 ORTHO05D000119 1.4e-12 76.6 147 32.7
BcaC09g48659 Brassica carinata HOM05D000256 ORTHO05D000119 1.8e-12 76.3 148 32.4
BolC1t04691H Brassica oleracea HOM05D000256 ORTHO05D000119 1.8e-12 76.3 148 32.4
BcaC07g37952 Brassica carinata HOM05D000256 ORTHO05D000119 3.9e-12 75.1 138 33.3
BolC8t48334H Brassica oleracea HOM05D000256 ORTHO05D000119 3.9e-12 75.1 138 33.3
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 8.8e-12 73.9 149 34.2
Carub.0003s1682 Capsella rubella HOM05D000256 ORTHO05D000119 2.5e-11 72.4 114 38.6
BcaC05g28829 Brassica carinata HOM05D000256 ORTHO05D000119 1.4e-09 66.6 103 35.0
BolC5t33677H Brassica oleracea HOM05D014510 ORTHO05D000119 1.4e-09 66.6 103 35.0
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.3e-07 60.1 140 28.6
BcaC06g32996 Brassica carinata HOM05D000256 ORTHO05D000119 3.8e-07 58.5 132 31.1
BolC8t48341H Brassica oleracea HOM05D000256 ORTHO05D000119 3.8e-07 58.5 122 31.1
Thhalv10027197m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.8e-07 58.5 107 32.7
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.0e-07 58.2 143 28.0
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 5.0e-07 58.2 147 28.6
A08p12390 Brassica napus HOM05D000256 ORTHO05D000119 5.0e-07 58.2 122 31.1
BraA08t33217Z Brassica rapa HOM05D000256 ORTHO05D000119 5.0e-07 58.2 122 31.1
Aa31LG2G15310 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.9e-06 56.2 108 30.6
CARHR222580 Cardamine hirsuta HOM05D000256 ORTHO05D000119 2.5e-06 55.8 150 28.0
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 3.2e-06 55.5 149 30.2
Aa31LG10G5930 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.2e-06 54.3 143 28.0
Aa31LG7G1640 Aethionema arabicum HOM05D000256 ORTHO05D000119 9.4e-06 53.9 126 31.0
BraA08t33226Z Brassica rapa HOM05D000256 ORTHO05D000119 9.4e-06 53.9 122 29.5
Carub.0007s2534 Capsella rubella HOM05D000256 ORTHO05D000119 9.4e-06 53.9 110 30.0


User provided reference genes

Program Settings