Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15960 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 6.8e-231 803.9 491 100.0
BolC3t17077H Brassica oleracea HOM05D008216 ORTHO05D011188 2.1e-99 367.1 376 59.8
BcaC01g03848 Brassica carinata HOM05D008216 ORTHO05D011188 7.6e-97 358.6 524 48.5
C03p47970 Brassica napus HOM05D008216 ORTHO05D011188 2.8e-91 340.1 375 55.5
A01p38150 Brassica napus HOM05D008216 ORTHO05D011188 3.5e-86 323.2 538 42.2
Thhalv10022078m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 1.9e-84 317.4 490 44.3
BolC1t04800H Brassica oleracea HOM05D008216 ORTHO05D011188 1.3e-83 314.7 549 41.2
C01p48400 Brassica napus HOM05D008216 ORTHO05D011188 2.1e-83 313.9 540 41.9
BraA01t03873Z Brassica rapa HOM05D008216 ORTHO05D011188 4.8e-83 312.8 542 42.4
BcaC09g48576 Brassica carinata HOM05D008216 ORTHO05D011188 2.6e-81 307.0 535 41.7
BcaB04g20890 Brassica carinata HOM05D008216 ORTHO05D011188 3.0e-77 293.5 428 44.4
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 1.4e-69 268.1 291 55.7
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 9.7e-68 261.9 277 56.7
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 4.8e-67 259.6 277 55.6
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 4.8e-67 259.6 277 55.6
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 4.8e-67 259.6 277 55.6
BcaB04g18868 Brassica carinata HOM05D008216 ORTHO05D011188 6.3e-67 259.2 200 73.0
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 8.2e-67 258.8 290 54.5
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.4e-66 258.1 294 52.0
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 5.3e-66 256.1 277 54.9
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 5.3e-66 256.1 277 54.9
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 6.9e-66 255.8 294 54.8
Sp3g14300 Schrenkiella parvula HOM05D008216 ORTHO05D011188 3.8e-64 250.0 274 53.6
BcaB04g20891 Brassica carinata HOM05D008216 ORTHO05D012788 1.9e-63 247.7 297 52.9
Aa31LG10G2510 Aethionema arabicum HOM05D008216 ORTHO05D011188 3.2e-63 246.9 267 53.9
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 4.2e-63 246.5 283 53.0
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 5.5e-63 246.1 285 51.9
Sp3g14290 Schrenkiella parvula HOM05D008216 ORTHO05D012788 1.2e-62 245.0 301 52.5
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 2.7e-62 243.8 280 52.9
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 2.7e-62 243.8 280 52.9
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 6.1e-62 242.7 280 52.5
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 6.1e-62 242.7 280 52.5
C01p48420 Brassica napus HOM05D008216 ORTHO05D012788 3.9e-61 240.0 297 51.2
A01p38160 Brassica napus HOM05D008216 ORTHO05D012788 8.8e-61 238.8 297 51.9
BraA01t03874Z Brassica rapa HOM05D008216 ORTHO05D012788 8.8e-61 238.8 297 51.9
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 1.5e-60 238.0 280 52.5
C01p48410 Brassica napus HOM05D008216 ORTHO05D012788 1.3e-59 235.0 297 50.5
BcaC09g48575 Brassica carinata HOM05D008216 ORTHO05D012788 2.2e-59 234.2 297 50.5
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 1.4e-58 231.5 270 51.9
BcaB06g25696 Brassica carinata HOM05D008216 ORTHO05D012788 4.1e-58 229.9 272 52.2
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 4.1e-58 229.9 291 51.5
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 4.1e-58 229.9 291 51.5
BcaC09g48573 Brassica carinata HOM05D008216 ORTHO05D012788 5.3e-58 229.6 297 50.2
BolC1t04801H Brassica oleracea HOM05D008216 ORTHO05D012788 5.3e-58 229.6 297 50.2
BolC5t33794H Brassica oleracea HOM05D008216 ORTHO05D012788 7.0e-58 229.2 291 51.5
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 9.1e-58 228.8 299 49.5
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 1.2e-57 228.4 299 49.5
AL3G28590 Arabidopsis lyrata HOM05D008216 ORTHO05D012788 2.9e-56 223.8 295 48.8
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 9.4e-55 218.8 247 54.3
THA.LOC104818006 Tarenaya hassleriana HOM05D008216 ORTHO05D011188 2.8e-51 207.2 304 45.4
CARHR091090 Cardamine hirsuta HOM05D008216 ORTHO05D012788 2.7e-49 200.7 564 36.2
Sp3g14310 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.5e-47 194.9 260 48.5
SpUN0970_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.0e-45 188.7 287 44.9
AL3G28600 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.4e-45 188.3 108 94.4
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 3.0e-45 187.2 274 45.3
CARHR090970 Cardamine hirsuta HOM05D008216 ORTHO05D011188 1.2e-38 165.2 194 54.1
BcaB04g18008 Brassica carinata HOM05D008216 ORTHO05D024112 1.2e-22 112.1 128 55.5
BolC4t24136H Brassica oleracea HOM05D029889 ORTHO05D024112 1.1e-13 82.4 88 54.5
SpUn0637_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 4.1e-10 70.5 115 44.3
C04p26710 Brassica napus HOM05D029889 ORTHO05D024112 5.4e-10 70.1 80 51.2
C05p51250 Brassica napus HOM05D029889 ORTHO05D024112 5.4e-10 70.1 80 51.2
BcaC01g01666 Brassica carinata HOM05D008216 ORTHO05D091918 1.9e-07 61.6 114 43.9


User provided reference genes

Program Settings