Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 6.0e-247 857.8 735 100.0
AL3G28590 Arabidopsis lyrata HOM05D008216 ORTHO05D012788 1.7e-217 760.0 773 86.9
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 3.2e-184 649.4 782 71.1
Sp3g14290 Schrenkiella parvula HOM05D008216 ORTHO05D012788 4.7e-167 592.4 776 73.8
BcaC09g48575 Brassica carinata HOM05D008216 ORTHO05D012788 2.7e-154 550.1 776 71.8
A01p38160 Brassica napus HOM05D008216 ORTHO05D012788 4.5e-154 549.3 783 71.8
BraA01t03874Z Brassica rapa HOM05D008216 ORTHO05D012788 5.9e-154 548.9 785 71.6
C01p48410 Brassica napus HOM05D008216 ORTHO05D012788 3.3e-152 543.1 780 71.7
BcaB04g20891 Brassica carinata HOM05D008216 ORTHO05D012788 4.4e-149 532.7 775 68.8
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 8.3e-148 528.5 775 70.6
BolC1t04801H Brassica oleracea HOM05D008216 ORTHO05D012788 1.6e-146 524.2 809 65.9
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 1.3e-145 521.2 780 70.0
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 1.1e-142 511.5 790 69.2
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 4.0e-142 509.6 784 69.4
BolC5t33794H Brassica oleracea HOM05D008216 ORTHO05D012788 4.4e-141 506.1 779 69.6
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 7.0e-139 498.8 793 67.7
BcaB06g25696 Brassica carinata HOM05D008216 ORTHO05D012788 9.9e-133 478.4 775 70.5
CARHR091090 Cardamine hirsuta HOM05D008216 ORTHO05D012788 3.4e-125 453.4 737 55.6
C01p48420 Brassica napus HOM05D008216 ORTHO05D012788 4.5e-101 373.2 333 69.4
BcaC09g48573 Brassica carinata HOM05D008216 ORTHO05D012788 7.1e-99 365.9 340 67.9
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 5.9e-77 293.1 780 55.9
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 2.2e-76 291.2 748 58.0
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 6.7e-73 279.6 787 56.4
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 8.8e-73 279.3 761 54.3
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 8.8e-73 279.3 762 53.5
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 8.8e-73 279.3 762 53.5
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 5.9e-69 266.5 741 57.4
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 1.4e-67 261.9 741 52.6
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 2.5e-67 261.2 759 49.7
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 1.0e-65 255.8 746 45.7
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 5.2e-65 253.4 788 55.5
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 2.6e-64 251.1 741 55.9
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 3.3e-64 250.8 761 52.6
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 4.4e-64 250.4 766 55.1
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 4.4e-64 250.4 761 52.0
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 1.0e-60 239.2 786 49.7
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 3.8e-60 237.3 782 51.9
Aa31LG10G2510 Aethionema arabicum HOM05D008216 ORTHO05D011188 6.8e-49 199.9 271 51.3
AT3G15960 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 1.5e-48 198.7 274 45.3
THA.LOC104818006 Tarenaya hassleriana HOM05D008216 ORTHO05D011188 5.0e-44 183.7 291 42.3
BcaC01g03848 Brassica carinata HOM05D008216 ORTHO05D011188 1.4e-41 175.6 296 39.5
BolC3t17077H Brassica oleracea HOM05D008216 ORTHO05D011188 1.4e-41 175.6 296 39.5
C03p47970 Brassica napus HOM05D008216 ORTHO05D011188 2.3e-41 174.9 271 41.3
BcaB04g20890 Brassica carinata HOM05D008216 ORTHO05D011188 8.0e-34 149.8 295 35.9
Thhalv10022078m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 1.0e-33 149.4 277 36.8
A01p38150 Brassica napus HOM05D008216 ORTHO05D011188 1.8e-33 148.7 295 35.6
BcaB04g18868 Brassica carinata HOM05D008216 ORTHO05D011188 2.3e-33 148.3 185 44.9
C01p48400 Brassica napus HOM05D008216 ORTHO05D011188 2.3e-33 148.3 277 36.5
BraA01t03873Z Brassica rapa HOM05D008216 ORTHO05D011188 2.3e-33 148.3 277 36.5
BolC1t04800H Brassica oleracea HOM05D008216 ORTHO05D011188 3.1e-33 147.9 273 36.6
BcaC09g48576 Brassica carinata HOM05D008216 ORTHO05D011188 3.4e-32 144.4 273 36.3
Sp3g14300 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.9e-27 128.6 247 34.8
Sp3g14310 Schrenkiella parvula HOM05D008216 ORTHO05D011188 6.4e-23 113.6 250 33.2
SpUN0970_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.4e-22 111.7 250 33.6
Aa31LG10G2520 Aethionema arabicum HOM05D008216 ORTHO05D058766 6.6e-20 103.6 146 47.3
CARHR090970 Cardamine hirsuta HOM05D008216 ORTHO05D011188 4.0e-17 94.4 186 33.3
AL3G28600 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.3e-12 79.3 106 41.5


User provided reference genes

Program Settings