Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 5.3e-98 360.9 171 100.0
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 8.5e-88 327.0 171 90.1
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 1.1e-87 326.6 171 88.9
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 1.5e-87 326.2 171 90.1
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.5e-87 326.2 163 92.0
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 2.5e-87 325.5 171 89.5
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 5.5e-87 324.3 171 88.9
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 5.5e-87 324.3 171 88.9
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 7.2e-87 323.9 162 92.0
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-86 323.2 169 88.8
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 1.2e-86 323.2 169 88.8
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 3.6e-86 321.6 169 88.2
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-84 316.6 167 86.2
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 3.4e-84 315.1 165 87.3
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 9.8e-84 313.5 167 85.6
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.2e-78 296.6 164 83.5
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 6.1e-78 294.3 164 79.9
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.1e-74 283.5 167 79.0
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 6.4e-43 177.9 143 61.5
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 1.9e-31 139.8 170 44.7
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 6.2e-30 134.8 165 43.6
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 8.1e-30 134.4 169 43.8
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.1e-29 134.0 136 48.5
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 1.4e-29 133.7 174 42.5
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 1.8e-29 133.3 136 48.5
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 1.8e-29 133.3 169 43.2
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 2.4e-29 132.9 157 42.7
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 6.9e-29 131.3 169 42.6
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 6.9e-29 131.3 169 42.6
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 6.9e-29 131.3 157 42.7
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 6.9e-29 131.3 156 43.6
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 9.0e-29 131.0 136 46.3
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 1.2e-28 130.6 166 41.6
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 1.5e-28 130.2 161 44.7
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 2.0e-28 129.8 135 46.7
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 3.4e-28 129.0 135 46.7
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 1.7e-27 126.7 135 45.9
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 1.1e-26 124.0 137 45.3
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 3.2e-26 122.5 165 41.2
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-23 114.0 161 39.8
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.2e-20 104.0 79 65.8
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 1.0e-19 100.9 158 34.8
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 1.0e-19 100.9 158 34.8
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 1.3e-19 100.5 158 34.8
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 1.3e-19 100.5 158 34.8
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 1.3e-19 100.5 158 34.8
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 2.2e-19 99.8 158 36.7
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 1.9e-18 96.7 158 34.8
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 4.2e-18 95.5 158 33.5
THA.LOC104810616 Tarenaya hassleriana HOM05D008154 ORTHO05D406818 1.6e-17 93.6 163 32.5
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 4.6e-17 92.0 161 34.2
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 3.9e-16 89.0 161 31.7
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 3.9e-16 89.0 169 32.5
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 3.9e-16 89.0 169 32.5
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 3.9e-16 89.0 161 31.1
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 5.1e-16 88.6 170 31.2
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 5.1e-16 88.6 161 34.2
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 1.5e-15 87.0 155 33.5
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 1.5e-15 87.0 170 31.8
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.9e-15 86.7 168 32.1
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 2.5e-15 86.3 170 31.2
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 2.5e-15 86.3 169 32.0
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 3.3e-15 85.9 161 30.4
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 3.7e-14 82.4 170 30.6
CARHR090950 Cardamine hirsuta HOM05D008154 ORTHO05D012553 4.8e-14 82.0 55 72.7
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 8.2e-14 81.3 160 33.1
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 4.1e-13 79.0 157 30.6
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 6.1e-09 65.1 122 30.3


User provided reference genes

Program Settings