Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 7.2e-158 560.5 269 100.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 7.0e-153 543.9 269 96.7
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 3.6e-149 531.6 269 94.1
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.4e-148 529.6 270 93.7
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 5.2e-148 527.7 269 94.1
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 1.2e-147 526.6 269 93.7
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 4.4e-147 524.6 269 93.3
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 4.4e-147 524.6 269 93.3
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 2.2e-146 522.3 269 92.9
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 1.6e-144 516.2 270 91.5
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 3.5e-144 515.0 268 90.7
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.0e-143 513.5 269 90.0
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.0e-143 513.5 269 92.2
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.9e-143 511.9 269 91.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.9e-142 509.2 270 90.7
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 3.3e-142 508.4 270 90.4
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 6.4e-138 494.2 270 88.1
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 5.0e-135 484.6 289 81.7
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.7e-119 433.0 275 75.3
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 9.6e-110 400.6 273 70.3
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 3.6e-109 398.7 269 71.0
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.8e-108 396.4 273 70.3
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 8.9e-108 394.0 282 68.8
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.5e-107 393.3 276 70.3
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.6e-107 392.5 266 70.3
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.6e-107 391.0 275 69.5
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.2e-106 389.4 271 69.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.4e-105 386.0 278 65.8
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 3.2e-105 385.6 257 70.8
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 5.4e-105 384.8 271 68.6
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 5.4e-105 384.8 215 79.1
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.2e-104 383.6 273 68.5
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.6e-104 383.3 220 77.7
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 2.7e-104 382.5 220 77.3
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 4.6e-104 381.7 252 69.0
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 4.6e-104 381.7 283 66.1
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 6.0e-104 381.3 249 70.7
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 7.8e-104 380.9 286 65.0
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 3.0e-103 379.0 220 75.9
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 5.1e-103 378.3 280 67.9
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 6.6e-103 377.9 280 65.7
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.1e-102 377.1 236 72.5
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.3e-102 375.6 265 65.7
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 3.3e-102 375.6 281 64.8
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.3e-102 375.2 286 63.3
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 5.6e-102 374.8 272 65.4
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 7.3e-102 374.4 283 65.7
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 7.3e-102 374.4 241 70.5
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 7.3e-102 374.4 276 64.1
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.3e-101 373.6 284 62.3
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.3e-101 373.6 210 77.6
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.6e-101 373.2 276 63.4
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.1e-101 372.9 239 71.5
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.8e-101 372.5 256 68.0
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.8e-101 372.5 249 68.3
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 3.6e-101 372.1 283 65.7
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 3.6e-101 372.1 278 66.9
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 6.2e-101 371.3 279 63.8
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 8.1e-101 370.9 277 65.3
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.1e-100 370.5 283 61.8
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.4e-100 370.2 282 63.1
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.8e-100 369.8 279 63.4
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.4e-100 369.4 274 65.3
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.1e-100 369.0 272 64.3
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.1e-100 369.0 278 65.1
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 3.1e-100 369.0 279 63.8
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 4.0e-100 368.6 283 64.3
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.3e-100 368.2 266 66.5
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 6.9e-100 367.9 260 67.7
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.9e-100 367.9 287 63.1
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.5e-99 366.7 281 63.7
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 2.0e-99 366.3 279 64.2
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.5e-99 365.2 275 63.3
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 7.6e-99 364.4 278 62.2
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 9.9e-99 364.0 266 64.7
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 9.9e-99 364.0 222 74.8
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.3e-98 363.6 213 75.6
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.7e-98 363.2 267 65.2
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 4.9e-98 361.7 282 60.6
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 4.9e-98 361.7 278 64.0
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 4.9e-98 361.7 274 63.5
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.1e-97 360.5 270 64.1
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 1.9e-97 359.8 289 63.3
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.6e-96 356.7 281 63.7
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.1e-96 356.3 256 67.6
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 3.0e-95 352.4 278 60.8
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 6.7e-95 351.3 235 65.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.1e-94 350.5 278 60.1
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.1e-94 350.5 271 62.0
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.3e-94 349.0 208 73.6
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 3.3e-94 349.0 209 72.2
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 4.3e-94 348.6 230 71.3
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.1e-93 346.3 279 59.9
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.8e-92 343.2 269 62.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 2.4e-92 342.8 208 73.6
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.5e-91 340.1 195 76.4
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.5e-91 340.1 204 73.0
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 5.8e-91 338.2 243 66.3
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.7e-90 336.7 279 59.9
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.9e-89 333.2 277 59.2
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 1.8e-84 316.6 218 65.6
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 8.4e-82 307.8 210 66.7
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.2e-80 303.9 259 57.1
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 4.1e-76 288.9 230 55.2
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 5.9e-75 285.0 271 55.4
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 5.5e-73 278.5 206 66.5
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.9e-70 270.0 214 54.7
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 7.4e-70 268.1 210 64.3
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 7.4e-70 268.1 249 51.0
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 9.7e-70 267.7 176 69.9
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 4.1e-68 262.3 269 49.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.2e-67 260.8 202 55.4
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 7.2e-65 251.5 147 76.9
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 6.1e-64 248.4 204 53.4
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 7.2e-57 224.9 238 51.7
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.8e-55 220.3 227 49.8
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 3.3e-54 216.1 147 63.3
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 2.2e-50 203.4 277 44.8
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.4e-44 183.3 163 58.3
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.1e-44 183.0 171 55.0
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.9e-33 147.1 117 62.4
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 8.9e-23 111.7 148 43.9
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 8.9e-23 111.7 69 68.1
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 2.8e-16 90.1 55 74.5
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-11 74.7 37 83.8


User provided reference genes

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