Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 9.5e-178 627.1 407 100.0
AL3G27450 Arabidopsis lyrata HOM05D004118 ORTHO05D004686 1.7e-155 553.1 416 86.5
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 4.9e-134 481.9 414 74.4
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 1.9e-133 479.9 421 73.6
Thhalv10020211m.g Eutrema salsugineum HOM05D004118 ORTHO05D004686 8.2e-129 464.5 417 69.8
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 2.5e-114 416.4 420 66.4
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 8.3e-89 331.6 429 55.2
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 1.4e-88 330.9 416 61.3
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 3.1e-88 329.7 415 55.4
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 7.0e-88 328.6 415 61.2
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 1.4e-80 304.3 411 57.4
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 1.4e-80 304.3 411 57.4
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 9.1e-80 301.6 416 57.5
C01p49420 Brassica napus HOM05D004118 ORTHO05D004686 4.1e-72 276.2 371 50.1
BcaC09g48474 Brassica carinata HOM05D004118 ORTHO05D004686 2.7e-71 273.5 371 50.1
BolC1t04899H Brassica oleracea HOM05D004118 ORTHO05D004686 2.7e-71 273.5 371 50.1
THA.LOC104798758 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 3.2e-56 223.4 346 53.2
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 1.5e-53 214.5 491 38.9
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 9.2e-48 195.3 446 42.2
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.5e-45 188.0 474 39.9
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 1.5e-45 188.0 455 36.3
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 4.3e-45 186.4 468 38.5
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 4.3e-45 186.4 468 37.4
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 1.6e-44 184.5 504 34.7
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.6e-44 183.3 452 35.2
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 8.1e-44 182.2 482 35.5
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 8.1e-44 182.2 432 44.4
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.4e-43 180.6 462 37.2
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 3.1e-43 180.3 463 38.0
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 3.1e-43 180.3 486 34.6
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 4.0e-43 179.9 472 34.1
RcHm_v2.0_Chr5g0032241 Rosa chinensis HOM05D004118 ORTHO05D004686 2.0e-42 177.6 464 39.9
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 2.6e-42 177.2 455 34.9
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 7.6e-42 175.6 488 33.2
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 9.9e-42 175.3 455 39.1
Sopen07g030960 Solanum pennellii HOM05D004118 ORTHO05D004686 1.7e-41 174.5 451 38.1
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 2.2e-41 174.1 481 38.9
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.2e-41 174.1 477 33.3
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 3.8e-41 173.3 453 37.1
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 4.9e-41 172.9 419 43.4
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 6.4e-41 172.6 439 42.1
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 6.4e-41 172.6 452 34.1
Gohir.D01G046700 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.4e-41 172.2 439 41.0
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 1.1e-40 171.8 452 34.3
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.1e-40 171.8 434 39.9
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 1.9e-40 171.0 480 36.9
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 4.2e-40 169.9 483 36.6
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 1.6e-39 167.9 462 33.3
arahy.Tifrunner.gnm1.ann1.YMW7LF Arachis hypogaea HOM05D004118 ORTHO05D004686 7.8e-39 165.6 410 39.5
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 1.0e-38 165.2 470 41.1
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 1.0e-38 165.2 458 32.3
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 1.3e-38 164.9 426 35.7
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 3.0e-38 163.7 430 40.5
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 3.9e-38 163.3 446 39.5
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 5.1e-38 162.9 478 34.3
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 5.1e-38 162.9 494 32.8
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 6.6e-38 162.5 491 31.0
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 6.6e-38 162.5 449 37.9
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 6.6e-38 162.5 453 38.6
arahy.Tifrunner.gnm1.ann1.82B0EJ Arachis hypogaea HOM05D004118 ORTHO05D004686 8.7e-38 162.2 408 39.5
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 8.7e-38 162.2 498 31.9
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 1.1e-37 161.8 489 32.7
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 1.5e-37 161.4 472 37.1
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 5.6e-37 159.5 441 40.1
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 1.3e-36 158.3 473 38.3
SGA_v2.0_scaffold73G24222 Striga asiatica HOM05D004118 ORTHO05D004686 1.8e-35 154.5 488 32.6
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 5.3e-35 152.9 445 42.2
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 6.9e-35 152.5 450 37.6
DCAR_021002 Daucus carota HOM05D004118 ORTHO05D004686 6.9e-35 152.5 493 32.3
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 6.9e-35 152.5 480 35.0
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 6.9e-35 152.5 419 34.6
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 9.0e-35 152.1 436 41.3
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.2e-34 151.8 417 36.2
CSS0009782 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 2.0e-34 151.0 449 37.9
Rhsim06G0203400 Rhododendron simsii HOM05D004118 ORTHO05D004686 2.0e-34 151.0 469 38.4
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 3.4e-34 150.2 451 33.7
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 5.8e-34 149.4 165 58.2
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 1.3e-33 148.3 166 54.8
vmacro11898 Vaccinium macrocarpon HOM05D004118 ORTHO05D004686 2.9e-33 147.1 448 38.8
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 3.8e-33 146.7 406 32.8
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 4.9e-33 146.4 425 40.7
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 4.9e-33 146.4 165 57.0
Cc05_g11580 Coffea canephora HOM05D004118 ORTHO05D004686 6.4e-33 146.0 178 64.6
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 8.4e-33 145.6 399 34.1
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 1.1e-32 145.2 423 39.2
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 1.4e-32 144.8 421 36.8
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 1.9e-32 144.4 423 37.8
DCAR_019575 Daucus carota HOM05D004118 ORTHO05D004686 4.2e-32 143.3 418 33.0
Sopen12g005780 Solanum pennellii HOM05D004118 ORTHO05D004686 7.1e-32 142.5 434 34.1
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 9.3e-32 142.1 479 31.9
ECA240G2123 Erigeron canadensis HOM05D004118 ORTHO05D004686 1.2e-31 141.7 406 30.8
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 1.6e-31 141.4 483 34.2
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 2.1e-31 141.0 453 34.2
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 3.5e-31 140.2 484 36.4
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 1.0e-30 138.7 417 37.2
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 1.0e-30 138.7 164 54.3
Nitab4.5_0000332g0190 Nicotiana tabacum HOM05D004118 ORTHO05D004686 1.3e-30 138.3 464 32.8
MSTRG.12889 Avicennia marina HOM05D004118 ORTHO05D004686 3.0e-30 137.1 475 30.7
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 3.0e-30 137.1 466 34.3
Ah.06g194460 Amaranthus hybridus HOM05D004118 ORTHO05D004686 3.9e-30 136.7 417 39.3
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 3.9e-30 136.7 185 47.6
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 6.6e-30 136.0 413 33.9
ECA236G3195 Erigeron canadensis HOM05D004118 ORTHO05D004686 1.1e-29 135.2 432 30.3
SGA_v2.0_scaffold70G23697 Striga asiatica HOM05D004118 ORTHO05D004686 1.9e-29 134.4 423 38.1
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 1.6e-28 131.3 158 49.4
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 4.8e-28 129.8 421 34.9
MSTRG.15246 Avicennia marina HOM05D004118 ORTHO05D004686 8.1e-28 129.0 445 31.2
Nn1g06377 Nelumbo nucifera HOM05D004118 ORTHO05D004686 1.1e-27 128.6 199 48.7
Oeu019296.1 Olea europaea HOM05D004118 ORTHO05D004686 3.1e-27 127.1 451 39.0
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 9.0e-27 125.6 488 35.9
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 2.0e-26 124.4 488 36.9
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 5.8e-26 122.9 479 35.1
Lsat_1_v5_gn_5_128820 Lactuca sativa HOM05D004118 ORTHO05D004686 1.7e-25 121.3 415 33.7
Lalb_Chr03g0030811 Lupinus albus HOM05D004118 ORTHO05D004686 2.2e-25 120.9 398 35.7
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 2.2e-25 120.9 473 35.3
unitig_747.g21581 Utricularia gibba HOM05D004118 ORTHO05D004686 2.9e-25 120.6 513 27.3
Lalb_Chr19g0134031 Lupinus albus HOM05D004118 ORTHO05D004686 3.8e-25 120.2 391 30.7
Nitab4.5_0003033g0050 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.8e-25 120.2 464 35.1
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 3.8e-25 120.2 453 34.9
AUR62036141 Chenopodium quinoa HOM05D004118 ORTHO05D004686 6.4e-25 119.4 444 37.2
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 8.4e-25 119.0 468 32.5
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 8.4e-25 119.0 503 34.6
Peaxi162Scf00000g00285 Petunia axillaris HOM05D004118 ORTHO05D004686 8.4e-25 119.0 443 29.3
HanXRQChr12g0372791 Helianthus annuus HOM05D004118 ORTHO05D004686 2.4e-24 117.5 183 43.7
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 4.2e-24 116.7 389 35.7
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 4.2e-24 116.7 404 29.7
ECA234G1224 Erigeron canadensis HOM05D004118 ORTHO05D004686 3.5e-23 113.6 417 32.9
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 7.9e-23 112.5 183 39.9
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 7.9e-23 112.5 443 35.7
EL10Ac4g08266 Beta vulgaris HOM05D004118 ORTHO05D004686 1.8e-22 111.3 174 45.4
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 2.3e-22 110.9 396 30.8
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 1.5e-21 108.2 444 32.2
CAN.G329.5 Capsicum annuum HOM05D004118 ORTHO05D004686 1.9e-21 107.8 171 42.1
SGA_v2.0_scaffold130G34343 Striga asiatica HOM05D004118 ORTHO05D004686 2.5e-21 107.5 412 32.3
Cc04_g12070 Coffea canephora HOM05D004118 ORTHO05D004686 3.3e-21 107.1 140 47.1
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 4.3e-21 106.7 427 34.2
Gohir.D08G032400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.6e-20 104.8 400 30.2
unitig_37.g12565 Utricularia gibba HOM05D004118 ORTHO05D004686 1.6e-20 104.8 406 30.8
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 1.1e-19 102.1 160 48.1
Gorai.004G029800 Gossypium raimondii HOM05D004118 ORTHO05D004686 1.4e-19 101.7 392 32.1
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 3.1e-19 100.5 298 40.9
AUR62019494 Chenopodium quinoa HOM05D004118 ORTHO05D004686 4.0e-19 100.1 439 34.6
HPP92_003871 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.5e-18 98.2 462 31.2
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 1.0e-17 95.5 160 41.2
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 3.8e-17 93.6 445 32.8
Os06g0352900 Oryza sativa ssp. japonica HOM05D004118 ORTHO05D004686 4.2e-16 90.1 191 36.1
Zm00001eb014970 Zea mays HOM05D004118 ORTHO05D004686 2.1e-15 87.8 171 38.6
HPP92_003896 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.3e-14 85.1 192 34.9
Zm00001eb395950 Zea mays HOM05D004118 ORTHO05D004686 2.3e-14 84.3 172 36.0
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 2.1e-12 77.8 421 29.9
TPR.G17527 Trifolium pratense HOM05D004118 ORTHO05D004686 4.8e-12 76.6 50 78.0
Hma1.2p1_0313F.1_g121640 Hydrangea macrophylla HOM05D004118 ORTHO05D004686 1.1e-11 75.5 375 29.1
HPP92_002942 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.1e-11 75.5 471 28.2
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 5.3e-11 73.2 182 35.7
GSVIVG01014262001 Vitis vinifera HOM05D004118 ORTHO05D003395 7.6e-10 69.3 78 53.8
CDE02G0061 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 6.5e-09 66.2 78 48.7
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 1.1e-08 65.5 387 33.3
HPP92_003895 Vanilla planifolia HOM05D004118 ORTHO05D004686 7.1e-08 62.8 40 70.0
Atru.chr2.2380 Acer truncatum HOM05D004118 ORTHO05D004686 1.2e-07 62.0 102 44.1
CDE10G0292 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 6.1e-07 59.7 390 26.9


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