Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G14560 Arabidopsis thaliana HOM05D010899 ORTHO05D012947 6.8e-84 313.9 155 100.0
AL3G26890 Arabidopsis lyrata HOM05D010899 ORTHO05D012947 3.9e-79 298.1 155 92.9
CARHR089520 Cardamine hirsuta HOM05D010899 ORTHO05D012947 5.8e-67 257.7 156 84.0
Carub.0003s1425 Capsella rubella HOM05D010899 ORTHO05D012947 1.7e-66 256.1 160 85.0
Sp3g12830 Schrenkiella parvula HOM05D010899 ORTHO05D012947 7.0e-65 250.8 156 82.1
Thhalv10021702m.g Eutrema salsugineum HOM05D010899 ORTHO05D012947 9.5e-62 240.4 158 79.1
A05p34870 Brassica napus HOM05D010899 ORTHO05D012947 5.2e-60 234.6 158 77.8
BraA05t22299Z Brassica rapa HOM05D010899 ORTHO05D012947 5.2e-60 234.6 158 77.8
BolC1t04944H Brassica oleracea HOM05D010899 ORTHO05D012947 6.8e-60 234.2 157 77.1
BcaC09g48427 Brassica carinata HOM05D010899 ORTHO05D012947 4.4e-59 231.5 157 75.8
C01p49870 Brassica napus HOM05D010899 ORTHO05D012947 4.4e-59 231.5 157 75.8
BcaC05g29061 Brassica carinata HOM05D010899 ORTHO05D012947 7.5e-59 230.7 158 77.8
C05p52720 Brassica napus HOM05D010899 ORTHO05D012947 7.5e-59 230.7 158 77.8
BolC5t33951H Brassica oleracea HOM05D010899 ORTHO05D012947 7.5e-59 230.7 158 77.8
BcaB06g25375 Brassica carinata HOM05D010899 ORTHO05D012947 4.9e-58 228.0 158 74.7
A01p39170 Brassica napus HOM05D010899 ORTHO05D012947 5.6e-54 214.5 150 76.0
BraA01t03962Z Brassica rapa HOM05D010899 ORTHO05D012947 5.6e-54 214.5 150 76.0
Aa31LG8G1780 Aethionema arabicum HOM05D010899 ORTHO05D012947 4.2e-25 118.6 157 45.2
THA.LOC104822599 Tarenaya hassleriana HOM05D010899 ORTHO05D012947 8.4e-18 94.4 167 43.1
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.2e-08 63.9 146 32.2
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.3e-07 59.7 150 34.0


User provided reference genes

Program Settings