Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G13360 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 3.9e-236 821.2 460 100.0
AL3G25210 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 7.9e-213 743.8 461 86.1
Sp3g11560 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.5e-168 595.5 495 68.7
Carub.0003s1274 Capsella rubella HOM05D003079 ORTHO05D003461 8.3e-154 547.7 474 67.3
Thhalv10020643m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 5.2e-148 528.5 496 63.9
CARHR087980 Cardamine hirsuta HOM05D003079 ORTHO05D003461 2.6e-147 526.2 479 67.2
BcaC01g03997 Brassica carinata HOM05D003079 ORTHO05D003461 7.3e-126 454.9 473 59.4
C03p46320 Brassica napus HOM05D003079 ORTHO05D003461 3.4e-123 446.0 475 58.9
BolC3t16901H Brassica oleracea HOM05D003079 ORTHO05D003461 8.4e-122 441.4 473 59.2
A03p38160 Brassica napus HOM05D003079 ORTHO05D003461 2.4e-121 439.9 472 58.9
BraA03t12969Z Brassica rapa HOM05D003079 ORTHO05D003461 2.4e-121 439.9 472 58.9
BcaB04g18754 Brassica carinata HOM05D003079 ORTHO05D003461 5.4e-121 438.7 442 61.1
Aa31LG8G580 Aethionema arabicum HOM05D003079 ORTHO05D003461 4.9e-114 415.6 486 54.1
BcaB04g21010 Brassica carinata HOM05D003079 ORTHO05D003461 5.1e-111 405.6 465 58.1
A01p40240 Brassica napus HOM05D003079 ORTHO05D003461 1.6e-109 400.6 459 56.9
BraA01t04061Z Brassica rapa HOM05D003079 ORTHO05D003461 2.8e-109 399.8 459 56.9
C01p51720 Brassica napus HOM05D003079 ORTHO05D003461 4.5e-107 392.5 438 59.4
BolC1t05117H Brassica oleracea HOM05D003079 ORTHO05D003461 5.8e-107 392.1 438 59.1
BcaC09g48303 Brassica carinata HOM05D003079 ORTHO05D003461 1.7e-106 390.6 438 59.1
THA.LOC104815679 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.1e-80 303.9 479 47.2
THA.LOC104810573 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 2.5e-57 227.3 461 42.3
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 5.2e-39 166.4 571 31.3
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 1.7e-37 161.4 554 32.1
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 8.3e-37 159.1 548 32.3
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 4.5e-35 153.3 425 34.1
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.7e-34 151.4 542 31.5
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 3.8e-34 150.2 563 31.3
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 8.6e-34 149.1 542 31.4
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.9e-33 147.9 471 34.8
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.9e-33 147.9 436 33.9
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 4.3e-33 146.7 567 30.2
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.6e-32 144.8 393 36.4
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 2.1e-32 144.4 567 30.0
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 2.1e-32 144.4 575 30.4
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.6e-32 143.7 421 35.4
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 6.1e-32 142.9 413 34.6
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 2.3e-31 141.0 419 34.1
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.3e-31 141.0 427 33.5
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 3.0e-31 140.6 430 34.2
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.0e-31 140.6 408 34.8
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.2e-31 139.8 429 34.5
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 1.2e-30 138.7 410 35.1
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.2e-30 138.7 430 34.7
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.6e-30 137.5 416 33.7
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 3.4e-30 137.1 369 32.8
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 5.8e-30 136.3 419 33.4
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 7.5e-30 136.0 424 34.4
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 7.5e-30 136.0 459 32.5
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 7.5e-30 136.0 403 35.0
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 9.8e-30 135.6 413 35.8
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.3e-29 135.2 424 33.3
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 3.7e-29 133.7 419 33.2
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 8.3e-29 132.5 447 33.6
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 8.3e-29 132.5 531 29.2
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.1e-28 132.1 447 33.6
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 2.4e-28 131.0 441 33.3
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 2.4e-28 131.0 471 29.5
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 4.1e-28 130.2 381 33.3
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 5.4e-28 129.8 424 32.1
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 9.2e-28 129.0 477 29.8
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-27 128.6 390 32.6
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-27 128.6 390 32.6
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-27 128.6 390 32.6
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 1.2e-27 128.6 435 33.6
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 4.6e-27 126.7 402 32.8
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 6.0e-27 126.3 425 33.2
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 6.0e-27 126.3 438 32.6
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 7.8e-27 125.9 571 29.9
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.3e-26 125.2 402 32.1
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.3e-26 125.2 425 32.9
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 3.0e-26 124.0 401 34.9
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 3.0e-26 124.0 573 29.8
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.0e-26 124.0 410 32.2
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.9e-26 123.6 376 33.5
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 1.1e-25 122.1 561 27.3
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 1.5e-25 121.7 443 33.2
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 1.9e-25 121.3 425 33.4
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 9.5e-25 119.0 605 28.8
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.2e-24 118.6 522 27.2
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 3.6e-24 117.1 459 31.4
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 4.7e-24 116.7 402 30.6
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 6.2e-24 116.3 407 32.4
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.8e-23 114.8 505 27.3
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 4.0e-23 113.6 381 31.5
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.8e-23 112.8 390 31.5
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 1.2e-22 112.1 458 28.6
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 1.2e-22 112.1 403 33.5
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 1.2e-22 112.1 416 30.8
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 1.5e-22 111.7 473 29.0
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 1.5e-22 111.7 458 28.8
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 7.5e-22 109.4 346 32.9
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 9.8e-22 109.0 394 31.7
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 1.3e-21 108.6 407 30.5
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 1.7e-21 108.2 403 32.0
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.7e-21 108.2 381 33.9
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 4.9e-21 106.7 383 32.9
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 6.4e-21 106.3 397 30.5
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 1.1e-20 105.5 312 35.6
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 2.4e-20 104.4 390 30.8
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 4.1e-20 103.6 368 31.0
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 7.0e-20 102.8 427 31.9
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 1.6e-19 101.7 425 30.6
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.6e-19 101.7 575 27.5
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 2.7e-19 100.9 384 31.2
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 3.5e-19 100.5 395 31.4
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 6.0e-19 99.8 479 27.6
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 6.0e-19 99.8 428 29.4
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.0e-19 99.8 568 29.4
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 6.0e-19 99.8 432 29.9
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 7.8e-19 99.4 475 27.2
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.3e-18 98.6 416 31.5
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 3.9e-18 97.1 457 27.6
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 3.9e-18 97.1 297 34.7
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 6.6e-18 96.3 377 31.0
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 8.6e-18 95.9 391 30.2
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 1.1e-17 95.5 405 27.7
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 1.1e-17 95.5 397 30.2
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 1.1e-17 95.5 427 29.7
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.9e-17 94.7 434 28.1
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.9e-17 94.7 446 30.0
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.5e-17 94.4 428 28.0
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.3e-17 94.0 359 30.4
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 3.3e-17 94.0 397 28.0
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 3.3e-17 94.0 401 30.2
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.3e-17 94.0 317 34.4
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 7.3e-17 92.8 248 36.7
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 2.1e-16 91.3 437 28.1
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.1e-16 91.3 397 28.5
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.8e-16 90.9 373 30.8
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 8.1e-16 89.4 507 27.0
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.8e-15 88.2 343 32.1
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.8e-15 88.2 419 30.1
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 1.8e-15 88.2 425 29.9
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.8e-15 88.2 375 31.7
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.1e-15 87.4 366 29.8
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 8.9e-15 85.9 398 31.2
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 6.4e-13 79.7 364 28.0
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 6.4e-13 79.7 362 30.4
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 1.4e-12 78.6 547 26.3
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 6.0e-11 73.2 482 28.2
ECA236G4881 Erigeron canadensis HOM05D003079 ORTHO05D003461 1.3e-10 72.0 397 28.7
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 3.0e-10 70.9 305 31.1
BraA05t22422Z Brassica rapa HOM05D033162 ORTHO05D041063 1.5e-09 68.6 164 34.8
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 1.5e-09 68.6 422 25.1
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.9e-09 68.2 425 27.5
A05p36180 Brassica napus HOM05D033162 ORTHO05D041063 5.6e-09 66.6 164 34.1
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 5.6e-09 66.6 434 26.5
Ca_09552_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 2.1e-08 64.7 135 39.3
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 2.8e-08 64.3 446 27.6
C03p63130 Brassica napus HOM05D003079 ORTHO05D003461 4.7e-08 63.5 45 82.2
CDE02G1968 Ceratophyllum demersum HOM05D000308 ORTHO05D003461 4.7e-08 63.5 377 28.4
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 8.1e-08 62.8 277 28.5
Ca_06048_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.1e-07 62.4 106 42.5
BcaC01g05490 Brassica carinata HOM05D041398 ORTHO05D032673 3.1e-07 60.8 59 62.7
C03p25880 Brassica napus HOM05D041398 ORTHO05D032673 3.1e-07 60.8 64 59.4
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.9e-07 59.3 234 29.1
BcaC04g20138 Brassica carinata HOM05D003079 ORTHO05D003461 1.2e-06 58.9 141 36.9
BolC3t14974H Brassica oleracea HOM05D041398 ORTHO05D032673 1.2e-06 58.9 86 50.0
BolC9t57600H Brassica oleracea HOM05D003079 ORTHO05D003461 1.2e-06 58.9 141 36.9
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 4.4e-06 57.0 89 44.9


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