Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G12510 Arabidopsis thaliana HOM05D014968 ORTHO05D014061 2.8e-86 322.0 174 100.0
Carub.0003s1184 Capsella rubella HOM05D014968 ORTHO05D014061 1.3e-35 153.7 184 58.7
Sp3g10640 Schrenkiella parvula HOM05D014968 ORTHO05D014061 2.7e-33 146.0 173 57.2
Thhalv10022424m.g Eutrema salsugineum HOM05D014968 ORTHO05D014061 9.8e-31 137.5 169 59.8
BcaB04g21072 Brassica carinata HOM05D014968 ORTHO05D014061 1.0e-19 100.9 162 46.9
BcaC09g48251 Brassica carinata HOM05D014968 ORTHO05D014061 1.1e-18 97.4 143 44.1
C01p52650 Brassica napus HOM05D014968 ORTHO05D014061 1.1e-18 97.4 143 44.1
BolC1t05205H Brassica oleracea HOM05D014968 ORTHO05D014061 1.1e-18 97.4 143 44.1
BNapus_Darmor_BZH_scaffold_149p00060 Brassica napus HOM05D014968 ORTHO05D014061 5.8e-15 85.1 156 43.6
BraA01t04130Z Brassica rapa HOM05D014968 ORTHO05D014061 3.2e-13 79.3 160 42.5
CARHR050180 Cardamine hirsuta HOM05D022234 ORTHO05D014061 7.8e-12 74.7 146 34.9
Thhalv10023871m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 3.9e-11 72.4 149 37.6
CARHR151140 Cardamine hirsuta HOM05D022234 ORTHO05D014061 1.9e-10 70.1 144 35.4
Carub.0002s0435 Capsella rubella HOM05D006070 ORTHO05D009119 1.2e-09 67.4 152 34.2
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.2e-09 67.4 138 37.7
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.6e-09 67.0 148 37.8
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.6e-09 67.0 148 37.8
CARHR087020 Cardamine hirsuta HOM05D022234 ORTHO05D014061 3.6e-09 65.9 147 32.7
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 1.1e-08 64.3 150 34.7
BraA06t23652Z Brassica rapa HOM05D006070 ORTHO05D009119 1.8e-08 63.5 141 38.3
BcaC02g09349 Brassica carinata HOM05D006070 ORTHO05D016789 3.1e-08 62.8 160 31.9
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 3.1e-08 62.8 127 37.0
BolC4t25721H Brassica oleracea HOM05D006070 ORTHO05D016789 3.1e-08 62.8 161 32.9
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 3.1e-08 62.8 127 37.0
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 4.0e-08 62.4 152 36.2
C06p03100 Brassica napus HOM05D006070 ORTHO05D009119 5.2e-08 62.0 142 38.0
BolC6t35429H Brassica oleracea HOM05D006070 ORTHO05D009119 5.2e-08 62.0 142 38.0
A06p04480 Brassica napus HOM05D006070 ORTHO05D009119 6.8e-08 61.6 142 38.0
BcaNung06358 Brassica carinata HOM05D006070 ORTHO05D009119 8.9e-08 61.2 137 37.2
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 8.9e-08 61.2 150 33.3
C06p04630 Brassica napus HOM05D006070 ORTHO05D009119 8.9e-08 61.2 137 37.2
BolC6t35592H Brassica oleracea HOM05D006070 ORTHO05D009119 8.9e-08 61.2 137 37.2
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 8.9e-08 61.2 150 33.3
C04p41630 Brassica napus HOM05D006070 ORTHO05D016789 1.2e-07 60.8 139 34.5
BolC4t25742H Brassica oleracea HOM05D006070 ORTHO05D016789 1.2e-07 60.8 139 34.5
C06p02990 Brassica napus HOM05D006070 ORTHO05D009119 1.5e-07 60.5 142 38.7
BolC6t35422H Brassica oleracea HOM05D006070 ORTHO05D009119 1.5e-07 60.5 142 38.7
BolC8t47189H Brassica oleracea HOM05D006070 ORTHO05D009119 2.0e-07 60.1 134 37.3
THA.LOC104819459 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.0e-07 60.1 160 35.0
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 2.0e-07 60.1 150 35.3
C08p03750 Brassica napus HOM05D006070 ORTHO05D009119 3.4e-07 59.3 153 35.3
C08p03960 Brassica napus HOM05D006070 ORTHO05D009119 3.4e-07 59.3 153 35.3
BcaC07g37029 Brassica carinata HOM05D006070 ORTHO05D009119 4.4e-07 58.9 134 37.3
BcaC08g43039 Brassica carinata HOM05D006070 ORTHO05D009119 4.4e-07 58.9 142 38.0
BcaC08g43048 Brassica carinata HOM05D006070 ORTHO05D009119 4.4e-07 58.9 142 38.0
A08p03550 Brassica napus HOM05D006070 ORTHO05D009119 4.4e-07 58.9 134 36.6
BcaB04g17295 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-07 58.5 142 36.6
BcaB07g33746 Brassica carinata HOM05D006070 ORTHO05D009119 5.8e-07 58.5 148 35.8
BraA04t16467Z Brassica rapa HOM05D006070 ORTHO05D016789 5.8e-07 58.5 142 34.5
BraA08t32408Z Brassica rapa HOM05D006070 ORTHO05D009119 5.8e-07 58.5 173 34.1
CARHR059500 Cardamine hirsuta HOM05D006070 ORTHO05D009119 5.8e-07 58.5 136 36.8
THA.LOC104810605 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 7.5e-07 58.2 174 32.8
BcaB04g17059 Brassica carinata HOM05D006070 ORTHO05D009119 9.8e-07 57.8 145 36.6
BcaB04g17293 Brassica carinata HOM05D006070 ORTHO05D009119 9.8e-07 57.8 142 35.9
A08p03790 Brassica napus HOM05D006070 ORTHO05D009119 9.8e-07 57.8 165 33.3
Thhalv10029256m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 9.8e-07 57.8 134 35.8
BraA08t32389Z Brassica rapa HOM05D006070 ORTHO05D009119 1.3e-06 57.4 134 36.6
CARHR058390 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.3e-06 57.4 155 35.5
C04p41420 Brassica napus HOM05D006070 ORTHO05D016789 1.7e-06 57.0 161 32.3
THA.LOC104810603 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.7e-06 57.0 174 32.2
THA.LOC104810604 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.7e-06 57.0 174 32.2
BcaB07g33759 Brassica carinata HOM05D006070 ORTHO05D009119 2.2e-06 56.6 148 36.5
Thhalv10029380m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 2.2e-06 56.6 163 33.7
A04p07750 Brassica napus HOM05D006070 ORTHO05D016789 2.9e-06 56.2 133 33.8
Thhalv10029235m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 2.9e-06 56.2 164 32.9
BcaB04g17318 Brassica carinata HOM05D006070 ORTHO05D009119 3.7e-06 55.8 169 34.9
Carub.0008s0896 Capsella rubella HOM05D006070 ORTHO05D009119 3.7e-06 55.8 144 32.6
AT5G38620 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.9e-06 55.5 139 34.5
Sp2g19880 Schrenkiella parvula HOM05D006070 ORTHO05D009119 4.9e-06 55.5 112 36.6
AT5G49420 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 6.4e-06 55.1 168 32.7
BcaB04g17320 Brassica carinata HOM05D006070 ORTHO05D009119 8.3e-06 54.7 142 35.2


User provided reference genes

Program Settings