Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.1e-252 875.2 423 100.0
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 7.4e-234 813.5 423 92.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.7e-215 751.9 427 86.7
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 8.1e-188 660.6 422 77.3
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 1.4e-184 649.8 424 76.9
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 2.8e-172 609.0 419 73.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.7e-167 592.4 425 71.3
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.7e-167 592.4 423 71.2
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.7e-167 592.4 423 71.2
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.9e-165 586.3 415 71.1
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.1e-163 580.5 418 70.1
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.2e-162 577.0 418 69.9
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 6.0e-151 538.1 435 65.1
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 5.1e-150 535.0 415 67.0
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 4.3e-149 531.9 430 66.0
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.7e-129 466.8 447 55.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.7e-129 466.8 447 55.5
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 5.2e-118 428.7 457 51.2
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 4.4e-117 425.6 446 51.6
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.1e-115 419.1 455 49.7
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 4.1e-115 419.1 435 52.9
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.6e-114 417.2 449 50.3
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 3.5e-114 416.0 455 48.4
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.0e-113 414.5 458 50.2
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 8.5e-113 411.4 460 50.0
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 4.2e-112 409.1 455 51.2
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 9.4e-112 407.9 447 50.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.4e-112 407.9 456 49.8
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-111 407.1 456 49.6
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 8.0e-111 404.8 455 47.7
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.8e-110 403.7 464 47.6
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.0e-110 402.9 446 49.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 4.0e-110 402.5 444 50.9
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.7e-110 401.7 448 50.7
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.2e-109 401.0 453 48.3
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 9.7e-109 397.9 444 50.9
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.2e-108 396.7 458 49.3
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.7e-108 396.0 464 47.6
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.1e-107 394.4 440 50.5
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.8e-107 393.7 453 47.9
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.8e-107 393.7 451 49.9
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.1e-107 392.5 453 47.9
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 5.3e-107 392.1 432 50.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.2e-106 391.0 441 49.9
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 5.9e-106 388.7 433 51.0
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.7e-106 388.3 449 48.1
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.0e-105 387.9 435 49.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.3e-105 387.5 450 49.1
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.9e-105 386.3 464 47.6
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 3.8e-105 386.0 458 47.4
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-104 384.4 460 47.4
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.1e-104 384.4 437 47.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.1e-104 384.4 441 46.7
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 2.5e-104 383.3 464 47.2
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.5e-104 382.1 448 46.0
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.2e-103 380.9 433 46.9
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.1e-103 380.2 473 45.2
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 2.1e-103 380.2 468 47.2
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 2.1e-103 380.2 468 47.2
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 2.7e-103 379.8 443 48.3
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.7e-103 379.0 458 47.6
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 8.0e-103 378.3 456 46.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.0e-102 377.9 453 47.7
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.8e-102 377.1 441 49.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.3e-102 376.7 441 49.7
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 5.2e-102 375.6 436 47.9
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.8e-102 375.2 457 47.3
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.5e-101 374.0 438 48.2
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.6e-101 373.2 443 48.1
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.4e-101 372.9 456 46.5
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 3.4e-101 372.9 449 48.8
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.4e-101 372.5 444 49.1
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.3e-100 370.9 452 46.9
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.2e-100 370.2 449 46.1
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.8e-99 367.1 444 48.9
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.4e-99 366.7 446 45.1
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.1e-99 366.3 444 48.2
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 3.1e-99 366.3 468 45.1
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.2e-98 364.4 449 45.7
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.6e-98 364.0 460 47.2
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 2.9e-97 359.8 440 46.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 3.8e-97 359.4 441 45.6
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.6e-95 354.0 454 44.9
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 3.1e-91 339.7 449 44.5
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.9e-88 330.5 455 44.2
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.6e-88 328.9 450 43.3
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 7.3e-88 328.6 489 41.7
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.6e-87 326.2 422 43.6
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.0e-86 324.7 442 42.3
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 4.4e-85 319.3 459 42.5
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 9.8e-85 318.2 437 41.9
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.7e-84 317.4 427 43.8
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-81 307.8 419 42.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 5.0e-81 305.8 404 43.8
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 4.4e-77 292.7 411 41.4
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 4.9e-76 289.3 298 53.4
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.3e-70 270.4 421 37.8
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.6e-66 257.7 344 42.4
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 9.5e-64 248.4 482 33.6
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 3.6e-63 246.5 318 45.9
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 5.6e-56 222.6 297 47.1
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 8.4e-52 208.8 326 39.9
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.7e-50 203.8 277 43.7
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 8.7e-49 198.7 273 45.4
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.5e-48 197.2 229 45.0
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.0e-41 175.3 513 28.8
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 5.6e-40 169.5 355 33.5
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 1.3e-39 168.3 213 43.7
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.1e-32 145.2 459 26.6
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.1e-26 124.4 102 53.9
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 6.1e-26 122.9 191 40.3
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 1.0e-25 122.1 548 24.1
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.2e-23 114.4 98 57.1
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.7e-23 113.6 141 44.0
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.3e-22 109.8 129 47.3
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 5.3e-22 109.8 98 55.1
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 8.8e-17 92.4 219 31.5
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 7.4e-16 89.4 117 47.9
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.1e-14 83.6 74 50.0
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.0e-12 76.6 60 65.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.2e-11 73.6 150 34.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.6e-10 70.5 90 42.2
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 3.6e-10 70.5 52 65.4
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 3.9e-09 67.0 91 44.0


User provided reference genes

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