Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 2.6e-71 271.9 134 100.0
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 7.4e-71 270.4 134 99.3
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 2.4e-69 265.4 134 95.5
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 5.3e-69 264.2 134 95.5
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 5.3e-69 264.2 134 95.5
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 5.3e-69 264.2 134 95.5
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 5.3e-69 264.2 134 95.5
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 7.0e-69 263.8 134 95.5
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.2e-68 263.1 134 94.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-68 262.7 134 94.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 1.5e-68 262.7 134 94.8
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.5e-66 256.1 144 88.9
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 2.5e-66 255.4 143 88.1
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 2.5e-66 255.4 143 88.8
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 3.2e-66 255.0 147 87.1
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 4.2e-66 254.6 134 92.5
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 7.2e-66 253.8 143 87.4
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.6e-65 252.7 141 87.9
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.6e-65 252.7 141 87.9
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.6e-57 224.9 135 81.5
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.4e-53 212.2 135 79.3
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 3.8e-51 204.9 131 75.6
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.2e-49 199.9 129 72.9
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.7e-49 198.7 129 75.2
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 74.0
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 72.5
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 72.5
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 72.5
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 72.5
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 72.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 72.5
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 72.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 73.3
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 1.8e-48 196.1 130 72.3
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 71.0
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 71.0
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.0e-48 194.9 131 71.8
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 4.0e-48 194.9 131 72.5
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 5.2e-48 194.5 131 71.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 5.2e-48 194.5 129 74.4
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 6.8e-48 194.1 134 71.6
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 6.8e-48 194.1 131 73.3
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 71.8
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.2e-47 193.4 131 71.0
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.2e-47 193.4 131 71.0
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.2e-47 193.4 131 72.5
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 2.0e-47 192.6 131 71.8
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 71.8
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 2.6e-47 192.2 131 69.5
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 3.4e-47 191.8 131 69.5
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 7.5e-47 190.7 129 71.3
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 7.5e-47 190.7 129 68.2
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 7.5e-47 190.7 131 71.8
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 9.8e-47 190.3 131 69.5
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.3e-46 189.9 129 68.2
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 68.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 131 69.5
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.7e-46 189.5 130 68.5
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 2.2e-46 189.1 131 68.7
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 4.9e-46 188.0 131 67.9
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 6.3e-46 187.6 128 70.3
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 69.5
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 6.3e-46 187.6 139 67.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 6.3e-46 187.6 125 71.2
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 67.2
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 8.3e-46 187.2 130 69.2
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 8.3e-46 187.2 130 69.2
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.4e-45 186.4 129 69.0
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.4e-45 185.7 129 66.7
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 2.4e-45 185.7 134 65.7
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 4.1e-45 184.9 128 65.6
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 5.4e-45 184.5 127 66.9
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 5.4e-45 184.5 133 64.7
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 9.1e-45 183.7 127 69.3
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 9.1e-45 183.7 129 69.0
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 2.0e-44 182.6 131 65.6
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 2.7e-44 182.2 128 68.0
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 3.5e-44 181.8 129 65.9
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 3.5e-44 181.8 124 71.0
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 4.5e-44 181.4 129 65.9
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 4.5e-44 181.4 130 65.4
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 5.9e-44 181.0 130 66.2
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 7.7e-44 180.6 129 66.7
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 67.2
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.0e-43 180.3 136 66.9
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 1.7e-43 179.5 134 64.2
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 3.8e-43 178.3 127 66.9
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.8e-43 178.3 131 63.4
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 5.0e-43 177.9 130 66.2
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 6.6e-43 177.6 126 68.3
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 6.6e-43 177.6 128 64.8
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 6.6e-43 177.6 128 64.8
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 5.6e-42 174.5 130 67.7
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.6e-42 174.5 127 64.6
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 9.5e-42 173.7 129 65.1
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 9.5e-42 173.7 127 64.6
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.6e-41 172.9 129 62.0
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 1.6e-41 172.9 130 61.5
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 2.1e-41 172.6 129 63.6
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 4.7e-41 171.4 154 55.2
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 6.1e-41 171.0 130 63.8
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 8.0e-41 170.6 130 64.6
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.0e-40 170.2 130 61.5
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.8e-40 169.5 131 62.6
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.8e-40 169.5 129 62.8
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 3.0e-40 168.7 129 62.0
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 6.8e-40 167.5 130 60.0
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 3.7e-38 161.8 130 61.5
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.4e-37 159.8 168 50.0
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 9.2e-37 157.1 129 61.2
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.0e-35 153.7 127 62.2
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 1.3e-35 153.3 102 72.5
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.2e-33 146.7 74 95.9
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 3.1e-32 142.1 127 58.3
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 2.6e-31 139.0 130 53.1
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.7e-30 136.3 126 55.6
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.4e-29 132.5 129 51.9
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.2e-29 132.1 129 51.2
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 7.0e-29 131.0 95 65.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.0e-27 127.1 93 62.4
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 3.0e-27 125.6 135 45.9
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 5.8e-23 111.3 69 75.4
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.2e-22 109.4 70 72.9
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.1e-21 107.1 70 70.0
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.1e-21 105.1 69 71.0
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.4e-21 104.8 74 66.2
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 9.2e-21 104.0 70 68.6
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 9.2e-21 104.0 72 66.7
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 4.6e-20 101.7 118 41.5
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 6.0e-20 101.3 71 66.2
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.7e-19 99.8 69 68.1
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.6e-19 97.4 62 77.4
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 8.6e-19 97.4 62 77.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 3.3e-18 95.5 83 59.0
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.3e-18 95.5 68 61.8
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 7.3e-18 94.4 72 58.3
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 3.6e-17 92.0 62 71.0
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.7e-17 91.7 62 71.0
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 9.9e-15 84.0 66 62.1
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.1e-13 80.5 53 66.0
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.7e-12 75.9 50 70.0
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 4.6e-12 75.1 75 49.3
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 4.6e-12 75.1 118 35.6
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-11 73.9 76 47.4
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 3.6e-09 65.5 104 30.8
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 1.2e-07 60.5 50 54.0
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 2.0e-07 59.7 28 96.4
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 7.6e-07 57.8 76 35.5
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 9.9e-07 57.4 28 89.3
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 9.9e-07 57.4 28 89.3
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.7e-06 56.6 48 50.0
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 8.4e-06 54.3 76 32.9


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