Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G10195 Arabidopsis thaliana HOM05D009742 ORTHO05D016608 4.9e-41 170.6 82 100.0
AL3G21530 Arabidopsis lyrata HOM05D009742 ORTHO05D016608 3.2e-32 141.4 82 86.6
Carub.0003s0936 Capsella rubella HOM05D009742 ORTHO05D016608 3.4e-26 121.3 82 74.4
Thhalv10022345m.g Eutrema salsugineum HOM05D009742 ORTHO05D016608 2.4e-24 115.2 77 74.0
BolC3t16602H Brassica oleracea HOM05D009742 ORTHO05D016608 4.6e-23 110.9 69 73.9
BcaB03g11570 Brassica carinata HOM05D009742 ORTHO05D016608 1.3e-22 109.4 78 67.9
BcaC01g04263 Brassica carinata HOM05D009742 ORTHO05D016608 2.3e-22 108.6 69 72.5
A03p35670 Brassica napus HOM05D009742 ORTHO05D016608 2.3e-22 108.6 78 65.4
BraA03t12742Z Brassica rapa HOM05D009742 ORTHO05D016608 2.3e-22 108.6 78 65.4
CARHR084680 Cardamine hirsuta HOM05D009742 ORTHO05D016608 5.1e-22 107.5 78 69.2
BolC1t05417H Brassica oleracea HOM05D009742 ORTHO05D039915 2.3e-14 82.0 73 60.3
BcaC09g48109 Brassica carinata HOM05D009742 ORTHO05D024001 3.0e-14 81.6 72 58.3
BolC1t05415H Brassica oleracea HOM05D009742 ORTHO05D024001 3.0e-14 81.6 72 58.3
BcaB04g21224 Brassica carinata HOM05D009742 ORTHO05D024001 1.1e-13 79.7 72 61.1
A01p42000 Brassica napus HOM05D009742 ORTHO05D024001 3.3e-13 78.2 72 58.3
BraA01t04268Z Brassica rapa HOM05D009742 ORTHO05D024001 3.3e-13 78.2 72 58.3
BcaC09g48110 Brassica carinata HOM05D009742 ORTHO05D032499 2.2e-09 65.5 60 60.0
C03p43320 Brassica napus HOM05D009742 ORTHO05D097810 1.4e-08 62.8 78 46.2
A01p42010 Brassica napus HOM05D009742 ORTHO05D032499 9.3e-08 60.1 72 50.0
BraA01t04269Z Brassica rapa HOM05D009742 ORTHO05D032499 9.3e-08 60.1 72 50.0
BcaB04g21223 Brassica carinata HOM05D009742 ORTHO05D024321 1.2e-07 59.7 72 51.4
A01p41060 Brassica napus HOM05D009742 ORTHO05D024321 6.7e-06 53.9 71 45.1
BNapus_Darmor_BZH_scaffold_78p00650 Brassica napus HOM05D009742 ORTHO05D024321 6.7e-06 53.9 71 45.1


User provided reference genes

Program Settings