Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G09470 Arabidopsis thaliana HOM05D001886 ORTHO05D005666 3.9e-238 827.8 438 100.0
AL3G20650 Arabidopsis lyrata HOM05D001886 ORTHO05D005666 2.5e-232 808.5 438 97.5
Carub.0003s0857 Capsella rubella HOM05D001886 ORTHO05D005666 2.5e-224 781.9 438 94.5
Thhalv10020764m.g Eutrema salsugineum HOM05D001886 ORTHO05D005666 9.8e-221 770.0 438 93.6
Sp3g07840 Schrenkiella parvula HOM05D001886 ORTHO05D005666 2.9e-217 758.4 437 92.2
C05p58560 Brassica napus HOM05D001886 ORTHO05D005666 1.5e-216 756.1 439 90.7
BolC5t34506H Brassica oleracea HOM05D001886 ORTHO05D005666 2.8e-215 751.9 439 90.4
A05p39530 Brassica napus HOM05D001886 ORTHO05D005666 5.2e-214 747.7 439 89.5
BcaC05g29675 Brassica carinata HOM05D001886 ORTHO05D005666 4.4e-213 744.6 438 90.0
BraA05t22734Z Brassica rapa HOM05D001886 ORTHO05D005666 4.4e-213 744.6 439 89.3
Aa31LG3G1960 Aethionema arabicum HOM05D001886 ORTHO05D005666 7.3e-208 727.2 437 88.8
THA.LOC104823252 Tarenaya hassleriana HOM05D001886 ORTHO05D005666 4.7e-199 698.0 437 84.2
THA.LOC104816289 Tarenaya hassleriana HOM05D001886 ORTHO05D005666 3.5e-186 655.2 413 80.9
Ciclev10011745m.g Citrus clementina HOM05D001886 ORTHO05D005666 3.1e-166 589.0 430 73.3
QL05p010709 Quercus lobata HOM05D001886 ORTHO05D005666 6.0e-162 574.7 431 71.2
Thecc.05G043700 Theobroma cacao HOM05D001886 ORTHO05D005666 7.9e-162 574.3 436 70.0
QL07p047480 Quercus lobata HOM05D001886 ORTHO05D005666 1.0e-161 573.9 431 71.0
CANSAT35G0217 Cannabis sativa HOM05D001886 ORTHO05D005666 3.9e-161 572.0 438 69.4
TWI74G1177 Tripterygium wilfordii HOM05D001886 ORTHO05D005666 3.9e-161 572.0 434 68.7
Cfa017420 Carpinus fangiana HOM05D001886 ORTHO05D005666 1.1e-160 570.5 432 70.1
GSVIVG01025523001 Vitis vinifera HOM05D001886 ORTHO05D005666 1.9e-160 569.7 431 69.4
Prupe.6G251100 Prunus persica HOM05D001886 ORTHO05D005666 7.4e-160 567.8 424 70.3
Potri.006G083700 Populus trichocarpa HOM05D001886 ORTHO05D005666 2.1e-159 566.2 437 68.2
Sabra06G0063300 Salix brachista HOM05D001886 ORTHO05D005666 2.8e-159 565.8 436 67.7
CiPaw.09G189500 Carya illinoinensis HOM05D001886 ORTHO05D005666 4.8e-159 565.1 432 69.9
Haze_20750 Corylus avellana HOM05D001886 ORTHO05D005666 1.1e-158 563.9 447 67.6
FAN05G4892 Fragaria x ananassa HOM05D001886 ORTHO05D005666 1.1e-158 563.9 437 68.0
RcHm_v2.0_Chr3g0467171 Rosa chinensis HOM05D001886 ORTHO05D005666 1.4e-158 563.5 435 69.0
Duzib093G1847 Durio zibethinus HOM05D001886 ORTHO05D005666 4.0e-158 562.0 433 69.1
Gohir.A09G158000 Gossypium hirsutum HOM05D001886 ORTHO05D005666 5.3e-158 561.6 433 69.5
Manes.09G087100 Manihot esculenta HOM05D001886 ORTHO05D005666 6.9e-158 561.2 431 68.7
FvH4_6g14211 Fragaria vesca HOM05D001886 ORTHO05D005666 3.4e-157 558.9 438 67.8
MD04G1123400 Malus domestica HOM05D001886 ORTHO05D005666 4.5e-157 558.5 425 69.4
CSS0014030 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 7.6e-157 557.8 431 69.6
Gorai.006G174800 Gossypium raimondii HOM05D001886 ORTHO05D005666 1.7e-156 556.6 437 69.3
Gohir.D09G153300 Gossypium hirsutum HOM05D001886 ORTHO05D005666 2.9e-156 555.8 438 69.2
Aqoxy2G02037 Aquilegia oxysepala HOM05D001886 ORTHO05D005666 3.8e-156 555.4 433 68.6
COL.COLO4_14849 Corchorus olitorius HOM05D001886 ORTHO05D005666 8.4e-156 554.3 433 67.9
Hma1.2p1_1481F.1_g286150 Hydrangea macrophylla HOM05D001886 ORTHO05D005666 1.1e-155 553.9 411 70.8
MD12G1139300 Malus domestica HOM05D001886 ORTHO05D005666 2.5e-155 552.7 425 68.7
TAR633G2154 Trochodendron aralioides HOM05D001886 ORTHO05D005666 2.5e-155 552.7 438 68.9
HanXRQChr07g0196201 Helianthus annuus HOM05D001886 ORTHO05D005666 2.7e-154 549.3 434 68.0
ECA238G4795 Erigeron canadensis HOM05D001886 ORTHO05D005666 7.9e-154 547.7 433 67.0
Atru.chr8.1947 Acer truncatum HOM05D001886 ORTHO05D005666 1.3e-153 547.0 431 67.5
CSS0019310 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 2.3e-153 546.2 431 68.9
CSS0002297 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 1.6e-151 540.0 433 67.4
Lsat_1_v5_gn_2_111601 Lactuca sativa HOM05D001886 ORTHO05D005666 2.1e-151 539.7 431 67.5
PGR004G0312 Punica granatum HOM05D001886 ORTHO05D005666 6.2e-151 538.1 432 67.1
Solyc09g010470.3 Solanum lycopersicum HOM05D001886 ORTHO05D005666 1.1e-150 537.3 432 66.7
MELO3C009272.2 Cucumis melo HOM05D001886 ORTHO05D005666 1.4e-150 537.0 431 66.1
Sopen09g005210 Solanum pennellii HOM05D001886 ORTHO05D005666 2.4e-150 536.2 432 66.4
SalBow3G2787 Salvia bowleyana HOM05D001886 ORTHO05D005666 3.1e-150 535.8 430 66.5
PGSC0003DMG400008924 Solanum tuberosum HOM05D001886 ORTHO05D005666 3.1e-150 535.8 432 66.2
Eucgr.K03155 Eucalyptus grandis HOM05D001886 ORTHO05D005666 6.9e-150 534.6 441 65.1
CsaV3_3G035030 Cucumis sativus L. HOM05D001886 ORTHO05D005666 5.8e-149 531.6 431 65.2
CAN.G97.10 Capsicum annuum HOM05D001886 ORTHO05D005666 7.6e-149 531.2 432 65.7
Ca_08782_v3 Cicer arietinum L. HOM05D001886 ORTHO05D005666 1.0e-148 530.8 429 66.9
DCAR_009246 Daucus carota HOM05D001886 ORTHO05D005666 2.2e-148 529.6 431 65.2
PGR004G0538 Punica granatum HOM05D001886 ORTHO05D005666 4.9e-148 528.5 432 66.0
Medtr7g099890 Medicago truncatula HOM05D001886 ORTHO05D005666 1.4e-147 526.9 431 65.7
Lalb_Chr01g0019241 Lupinus albus HOM05D001886 ORTHO05D005666 4.2e-147 525.4 429 66.0
ClCG00G003200 Citrullus lanatus HOM05D001886 ORTHO05D005666 5.5e-147 525.0 431 64.3
ClCG10G020980 Citrullus lanatus HOM05D001886 ORTHO05D005666 5.5e-147 525.0 431 64.3
arahy.Tifrunner.gnm1.ann1.LM62V2 Arachis hypogaea HOM05D001886 ORTHO05D005666 2.1e-146 523.1 426 64.6
Migut.J00351 Erythranthe guttata HOM05D001886 ORTHO05D005666 4.6e-146 521.9 432 65.3
TPR.G21472 Trifolium pratense HOM05D002608 ORTHO05D005666 4.6e-146 521.9 414 67.1
Sed0005778 Sechium edule HOM05D001886 ORTHO05D005666 7.9e-146 521.2 408 67.2
PSO339G5853 Papaver somniferum HOM05D001886 ORTHO05D005666 1.0e-145 520.8 439 64.2
Lj1g0000746 Lotus japonicus HOM05D001886 ORTHO05D005666 1.3e-145 520.4 429 65.3
Prupe.6G251000 Prunus persica HOM05D001886 ORTHO05D005666 1.8e-145 520.0 433 64.0
Sc20g0004960 Simmondsia chinensis HOM05D001886 ORTHO05D005666 3.0e-145 519.2 434 62.9
MD04G1123300 Malus domestica HOM05D001886 ORTHO05D005666 1.9e-144 516.5 427 65.1
Medtr7g099910 Medicago truncatula HOM05D001886 ORTHO05D005666 4.3e-144 515.4 432 64.4
FAN09G1438 Fragaria x ananassa HOM05D001886 ORTHO05D005666 7.4e-144 514.6 520 56.3
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 1.3e-143 513.8 432 66.2
PSO339G4978 Papaver somniferum HOM05D001886 ORTHO05D005666 2.2e-143 513.1 427 65.6
PSO339G5613 Papaver somniferum HOM05D001886 ORTHO05D005666 2.2e-143 513.1 427 65.6
PSO648G0053 Papaver somniferum HOM05D001886 ORTHO05D005666 4.1e-142 508.8 427 65.3
MSTRG.5681 Avicennia marina HOM05D001886 ORTHO05D005666 6.9e-142 508.1 431 63.8
AUR62041035 Chenopodium quinoa HOM05D001886 ORTHO05D005666 1.2e-141 507.3 428 62.6
VMungo1383G3275 Vigna mungo HOM05D001886 ORTHO05D005666 1.0e-140 504.2 432 62.7
Hma1.2p1_1707F.1_g298500 Hydrangea macrophylla HOM05D001886 ORTHO05D005666 1.7e-140 503.4 445 63.4
Lj1g0014450 Lotus japonicus HOM05D001886 ORTHO05D005666 2.9e-140 502.7 431 62.2
Hund10629 Selenicereus undatus HOM05D001886 ORTHO05D005666 2.9e-140 502.7 427 62.3
Phvul.001G169800 Phaseolus vulgaris HOM05D001886 ORTHO05D005666 6.5e-140 501.5 429 62.9
Glyma.19G173000 Glycine max HOM05D001886 ORTHO05D005666 1.4e-139 500.4 432 64.1
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 1.4e-139 500.4 426 63.4
Glyma.03G172100 Glycine max HOM05D001886 ORTHO05D005666 1.9e-139 500.0 430 62.6
Hma1.2p1_1065F.1_g253710 Hydrangea macrophylla HOM05D001886 ORTHO05D005666 1.9e-139 500.0 437 62.9
ATR0559G352 Amborella trichopoda HOM05D001886 ORTHO05D005666 2.5e-139 499.6 437 61.3
Nitab4.5_0002077g0040 Nicotiana tabacum HOM05D001886 ORTHO05D005666 7.9e-138 494.6 432 61.8
Nn2g10428 Nelumbo nucifera HOM05D001886 ORTHO05D005666 1.0e-137 494.2 430 63.5
Lj2A99T56 Lonicera japonica HOM05D001886 ORTHO05D005666 6.7e-137 491.5 374 69.0
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 1.1e-136 490.7 426 65.7
RcHm_v2.0_Chr3g0467181 Rosa chinensis HOM05D001886 ORTHO05D005666 2.5e-136 489.6 433 62.1
FvH4_6g14220 Fragaria vesca HOM05D001886 ORTHO05D005666 3.3e-136 489.2 440 61.6
Ah.12g062350 Amaranthus hybridus HOM05D001886 ORTHO05D005666 9.7e-136 487.6 427 60.9
Oeu036169.1 Olea europaea HOM05D001886 ORTHO05D005666 1.3e-135 487.3 431 60.1
arahy.Tifrunner.gnm1.ann1.QN2KEZ Arachis hypogaea HOM05D001886 ORTHO05D005666 3.7e-135 485.7 426 61.5
FAN09G0883 Fragaria x ananassa HOM05D002354 ORTHO05D005666 6.3e-135 485.0 440 60.7
FAN14G0919 Fragaria x ananassa HOM05D001886 ORTHO05D005666 1.1e-134 484.2 440 61.1
Oeu036166.1 Olea europaea HOM05D001886 ORTHO05D005666 1.4e-134 483.8 431 61.0
Psat3g049200 Pisum sativum HOM05D001886 ORTHO05D005666 4.1e-134 482.3 417 63.3
Sed0018380 Sechium edule HOM05D001886 ORTHO05D005666 6.9e-134 481.5 368 66.6
Lj1g0019565 Lotus japonicus HOM05D001886 ORTHO05D005666 2.0e-133 479.9 406 64.3
Rhsim04G0155900 Rhododendron simsii HOM05D001886 ORTHO05D005666 1.3e-132 477.2 476 58.4
Lalb_Chr20g0113251 Lupinus albus HOM05D001886 ORTHO05D005666 2.1e-130 469.9 432 60.9
Cc06_g02890 Coffea canephora HOM05D001886 ORTHO05D005666 5.1e-129 465.3 433 58.0
Oeu060049.1 Olea europaea HOM05D001886 ORTHO05D005666 3.3e-128 462.6 419 62.8
Os12g0566900 Oryza sativa ssp. japonica HOM05D001886 ORTHO05D005666 2.8e-127 459.5 416 61.3
Zm00001eb028780 Zea mays HOM05D001886 ORTHO05D005666 8.2e-127 458.0 428 59.8
FAN09G1880 Fragaria x ananassa HOM05D001886 ORTHO05D005666 1.4e-126 457.2 440 58.9
Peaxi162Scf00039g01233 Petunia axillaris HOM05D001886 ORTHO05D005666 1.7e-124 450.3 371 64.4
CDE07G1313 Ceratophyllum demersum HOM05D001886 ORTHO05D005666 4.2e-123 445.7 408 58.1
unitig_578.g15699 Utricularia gibba HOM05D001886 ORTHO05D005666 1.1e-120 437.6 432 55.1
AUR62041759 Chenopodium quinoa HOM05D001886 ORTHO05D005666 4.1e-118 429.1 428 55.8
CARHR083880 Cardamine hirsuta HOM05D001886 ORTHO05D005666 3.8e-116 422.5 255 91.0
HPP92_018059 Vanilla planifolia HOM05D001886 ORTHO05D005666 1.1e-115 421.0 438 55.3
CSS0035971 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 7.2e-115 418.3 434 57.4
Actinidia05302 Actinidia chinensis HOM05D001886 ORTHO05D005666 3.6e-114 416.0 431 55.0
vmacro08662 Vaccinium macrocarpon HOM05D001886 ORTHO05D005666 2.0e-112 410.2 517 49.7
Dinv37200 Davidia involucrata HOM05D001886 ORTHO05D005666 1.1e-107 394.4 324 66.0
TPR.G21468 Trifolium pratense HOM05D001886 ORTHO05D005666 1.7e-103 380.6 342 61.1
Nitab4.5_0003267g0040 Nicotiana tabacum HOM05D001886 ORTHO05D005666 9.1e-102 374.8 432 51.6
SGA_v2.0_scaffold126G33811 Striga asiatica HOM05D001886 ORTHO05D005666 1.6e-101 374.0 429 52.0
Psat3g049040 Pisum sativum HOM05D001886 ORTHO05D005666 8.0e-98 361.7 303 63.0
Lj2A2G29 Lonicera japonica HOM05D001886 ORTHO05D005666 1.8e-97 360.5 321 63.2
EL10As1g23100 Beta vulgaris HOM05D001886 ORTHO05D005666 9.8e-96 354.8 297 62.3
CARHR083890 Cardamine hirsuta HOM05D001886 ORTHO05D005666 1.3e-92 344.4 184 93.5
Pp3c8_1230 Physcomitrium patens HOM05D001886 ORTHO05D005666 3.1e-89 333.2 437 45.5
Mapoly0179s0003 Marchantia polymorpha HOM05D001886 ORTHO05D005666 7.5e-88 328.6 430 44.2
SEGI_05360 Sequoiadendron giganteum HOM05D001886 ORTHO05D005666 1.7e-84 317.4 275 61.1
Gohir.D04G119800 Gossypium hirsutum HOM05D001886 ORTHO05D005666 7.1e-70 268.9 413 44.3
Migut.O00944 Erythranthe guttata HOM05D001886 ORTHO05D005666 3.5e-69 266.5 323 49.5
Actinidia13134 Actinidia chinensis HOM05D001886 ORTHO05D005666 1.2e-66 258.1 201 68.7
Actinidia13133 Actinidia chinensis HOM05D001886 ORTHO05D005666 4.0e-65 253.1 180 71.7
HPP92_018052 Vanilla planifolia HOM05D001886 ORTHO05D005666 7.6e-56 222.2 190 61.6
Os12g0566800 Oryza sativa ssp. japonica HOM05D001886 ORTHO05D005666 8.7e-52 208.8 172 62.2
CSS0044683 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 1.1e-49 201.8 160 69.4
BcaC05g29677 Brassica carinata HOM05D001886 ORTHO05D005666 9.9e-48 195.3 115 84.3
ATR0559G335 Amborella trichopoda HOM05D001886 ORTHO05D005666 3.8e-47 193.4 176 58.5
CSS0017297 Camellia sinensis var. sinensis HOM05D001886 ORTHO05D005666 2.1e-42 177.6 147 68.0
MD12G1139200 Malus domestica HOM05D001886 ORTHO05D005666 1.0e-39 168.7 242 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1966 Anthoceros agrestis HOM05D001886 ORTHO05D005666 4.9e-39 166.4 139 56.8
Psat3g053880 Pisum sativum HOM05D000335 ORTHO05D005666 2.3e-36 157.5 120 70.8
MD12G1139100 Malus domestica HOM05D001886 ORTHO05D005666 1.3e-26 125.2 89 67.4
FAN11G3241 Fragaria x ananassa HOM05D001164 ORTHO05D001031 2.2e-23 114.4 80 72.5
FAN02G0854 Fragaria x ananassa HOM05D001886 ORTHO05D005666 1.0e-20 105.5 104 57.7
Os12g0567000 Oryza sativa ssp. japonica HOM05D001886 ORTHO05D005666 6.3e-18 96.3 98 53.1
AagrBONN_evm.TU.Sc2ySwM_362.1965 Anthoceros agrestis HOM05D001886 ORTHO05D005666 9.1e-17 92.4 113 47.8
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 2.7e-13 80.9 372 25.8
TAR636G1555 Trochodendron aralioides HOM05D001886 ORTHO05D005666 1.0e-12 79.0 161 36.0
FAN05G0933 Fragaria x ananassa HOM05D001164 ORTHO05D001031 2.8e-10 70.9 44 77.3
Lsat_1_v5_gn_7_25540 Lactuca sativa HOM05D001886 ORTHO05D005666 8.2e-10 69.3 51 70.6
SMO197G0098 Selaginella moellendorffii HOM05D001886 ORTHO05D005666 3.1e-09 67.4 439 23.0
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 7.2e-06 56.2 212 23.1


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