Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.3e-282 974.9 510 100.0
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.2e-280 968.4 510 99.4
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 4.1e-279 964.1 510 99.0
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.2e-275 952.6 510 97.5
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 3.6e-275 951.0 510 97.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 6.1e-275 950.3 510 95.9
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.4e-274 949.1 510 95.9
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.8e-274 948.7 510 97.3
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.3e-274 948.3 510 95.9
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.2e-273 946.0 510 95.5
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.5e-273 945.7 510 95.3
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.3e-272 942.6 510 95.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 3.2e-271 937.9 510 95.5
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 5.9e-270 933.7 510 93.5
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 7.8e-270 933.3 510 95.3
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 1.0e-269 932.9 510 95.1
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 1.7e-269 932.2 510 95.1
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 3.5e-262 907.9 510 93.1
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 4.6e-262 907.5 510 92.9
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 4.6e-262 907.5 510 92.9
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.3e-261 906.0 510 92.7
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 3.9e-261 904.4 494 95.3
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 6.8e-258 893.6 494 93.1
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 4.9e-256 887.5 511 87.5
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 2.4e-255 885.2 510 87.8
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.4e-255 885.2 510 88.0
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 9.2e-255 883.2 510 87.8
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 9.2e-255 883.2 510 87.6
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 86.9
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.2e-254 882.9 510 88.0
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.6e-254 882.5 510 87.6
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 3.5e-254 881.3 510 87.6
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 4.6e-254 880.9 510 89.0
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 4.6e-254 880.9 511 87.7
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 7.8e-254 880.2 510 86.5
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 2.3e-253 878.6 511 86.7
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 3.0e-253 878.2 511 86.9
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 86.9
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 5.1e-253 877.5 510 87.1
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 6.6e-253 877.1 510 87.6
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 6.6e-253 877.1 511 86.7
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 87.3
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 4.3e-252 874.4 510 86.3
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 9.5e-252 873.2 511 86.9
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 87.5
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 86.5
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 86.5
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 3.6e-251 871.3 510 87.1
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 87.3
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.8e-250 869.0 511 86.9
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 86.1
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 3.1e-250 868.2 511 86.7
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 5.2e-250 867.5 510 85.9
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 8.9e-250 866.7 510 86.9
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 86.7
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 1.5e-249 865.9 510 85.3
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 87.3
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 4.4e-249 864.4 510 85.7
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 5.8e-249 864.0 510 85.9
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 5.8e-249 864.0 510 85.9
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 7.6e-249 863.6 510 85.7
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 85.7
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 85.9
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 87.1
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.3e-248 862.8 510 85.9
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 86.3
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 2.9e-248 861.7 510 85.5
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 85.3
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 1.1e-247 859.8 510 86.1
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 1.4e-247 859.4 510 86.3
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.4e-247 858.6 510 85.5
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 7.1e-247 857.1 510 85.5
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-246 855.9 512 85.2
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.6e-246 855.9 510 85.9
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 2.1e-246 855.5 510 85.3
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 2.1e-246 855.5 510 84.5
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 7.8e-246 853.6 509 84.9
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.3e-245 852.8 510 84.5
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.3e-245 852.0 511 84.5
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 2.3e-245 852.0 510 85.9
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 2.3e-245 852.0 510 84.5
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 5.1e-245 850.9 510 85.7
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 1.1e-244 849.7 510 84.7
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.3e-244 848.2 511 84.7
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 5.6e-244 847.4 511 84.1
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 5.6e-244 847.4 510 84.5
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 3.6e-243 844.7 527 82.7
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 3.6e-243 844.7 510 85.3
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 6.2e-243 844.0 494 87.4
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.4e-242 842.8 510 84.3
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 5.2e-242 840.9 510 83.5
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 5.2e-242 840.9 549 79.4
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 83.8
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 5.8e-241 837.4 510 83.3
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 9.9e-241 836.6 510 83.3
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 83.7
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 83.2
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.1e-239 833.2 511 83.6
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.4e-239 832.8 511 83.2
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.9e-239 832.4 510 82.5
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.9e-239 832.4 510 82.5
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.9e-239 832.4 510 82.5
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.4e-239 832.0 511 82.8
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 3.2e-239 831.6 494 87.0
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.2e-239 831.2 510 82.7
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 4.2e-239 831.2 510 82.5
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 6.0e-238 827.4 472 89.4
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 7.8e-238 827.0 510 81.8
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 1.0e-237 826.6 512 83.2
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.0e-237 825.1 512 83.2
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 8.7e-237 823.5 505 83.6
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 4.3e-236 821.2 511 81.6
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.6e-235 819.3 524 80.3
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 8.1e-235 817.0 441 95.7
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.5e-233 812.8 556 77.3
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 9.9e-233 810.1 479 85.0
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 8.4e-232 807.0 494 84.2
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 9.3e-231 803.5 494 82.6
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 1.3e-229 799.7 511 80.2
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 7.4e-228 793.9 512 80.3
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.1e-226 790.0 547 75.5
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.5e-225 786.2 511 77.5
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 2.2e-224 782.3 511 79.5
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-222 776.5 524 77.9
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-222 776.5 524 77.9
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 2.1e-222 775.8 511 76.5
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.5e-220 769.6 510 79.0
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 3.7e-219 765.0 512 78.1
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 6.2e-219 764.2 510 78.0
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 3.2e-207 725.3 472 81.4
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 3.0e-205 718.8 511 74.4
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 9.1e-202 707.2 413 86.9
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 2.0e-201 706.1 503 73.0
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.1e-191 673.7 510 70.0
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 1.0e-189 667.2 514 64.4
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.1e-186 655.2 503 67.2
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 2.5e-183 646.0 375 87.2
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.6e-180 636.0 468 70.7
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.5e-175 619.4 514 59.7
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.8e-170 603.2 365 84.9
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 2.9e-168 595.9 379 80.2
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 9.5e-167 590.9 364 83.0
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 2.1e-166 589.7 511 60.5
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 1.5e-164 583.6 515 58.1
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 9.8e-164 580.9 494 59.7
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 1.6e-161 573.5 504 63.7
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 8.9e-157 557.8 345 84.1
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 7.5e-156 554.7 325 88.3
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.6e-153 547.0 499 54.3
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.3e-147 527.3 457 66.1
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 1.4e-146 523.9 307 88.6
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.0e-137 491.9 284 89.1
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 1.2e-129 467.6 383 61.9
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.4e-117 426.8 254 83.9
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.5e-116 424.1 509 47.2
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-110 404.1 245 84.9
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 1.2e-105 387.9 484 44.4
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.0e-105 385.6 386 54.7
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.5e-103 380.9 267 74.9
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.3e-94 351.3 511 38.4
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 9.1e-77 292.0 199 76.9
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.7e-70 271.2 343 46.1
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 3.8e-67 260.0 503 37.6
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 4.5e-60 236.5 142 84.5
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.5e-58 229.6 312 46.5
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 1.6e-57 228.0 365 42.2
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 7.5e-47 192.6 117 79.5
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.3e-43 181.8 206 51.9
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.1e-42 178.7 171 63.2
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.0e-41 172.6 197 49.7
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 1.9e-34 151.4 106 74.5
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 2.9e-30 137.5 82 89.0
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.1e-29 135.6 119 57.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 1.2e-20 105.5 121 57.0
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 5.1e-11 73.6 67 58.2
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 8.1e-09 66.2 37 83.8
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 3.8e-06 57.4 38 73.7


User provided reference genes

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