Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G08650 Arabidopsis thaliana HOM05D004172 ORTHO05D006010 0.0e+00 1144.0 596 100.0
AL3G19650 Arabidopsis lyrata HOM05D004172 ORTHO05D006010 0.0e+00 1124.4 596 98.0
Carub.0003s0778 Capsella rubella HOM05D004172 ORTHO05D006010 0.0e+00 1104.0 596 95.6
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 0.0e+00 1102.8 596 95.6
CARHR082950 Cardamine hirsuta HOM05D004172 ORTHO05D006010 0.0e+00 1094.0 596 95.1
Thhalv10020349m.g Eutrema salsugineum HOM05D004172 ORTHO05D006010 0.0e+00 1092.0 596 94.5
BraA03t12811Z Brassica rapa HOM05D004172 ORTHO05D006010 0.0e+00 1089.7 596 94.3
BolC3t16675H Brassica oleracea HOM05D004172 ORTHO05D006010 0.0e+00 1086.6 595 94.3
A03p36430 Brassica napus HOM05D004172 ORTHO05D006010 0.0e+00 1078.9 596 93.8
BcaC09g47981 Brassica carinata HOM05D004172 ORTHO05D006010 6.1e-311 1070.1 597 92.6
BolC1t05497H Brassica oleracea HOM05D004172 ORTHO05D006010 1.5e-309 1065.4 598 92.5
BcaB04g21247 Brassica carinata HOM05D004172 ORTHO05D006010 9.9e-309 1062.8 598 92.5
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus HOM05D004172 ORTHO05D006010 2.1e-306 1055.0 598 91.8
BolC5t34577H Brassica oleracea HOM05D004172 ORTHO05D006010 2.7e-306 1054.7 597 92.1
BcaC01g04188 Brassica carinata HOM05D004172 ORTHO05D006010 1.1e-304 1049.3 595 92.1
A05p40120 Brassica napus HOM05D004172 ORTHO05D006010 1.5e-304 1048.9 597 91.8
C05p59200 Brassica napus HOM05D004172 ORTHO05D006010 1.9e-304 1048.5 597 92.0
BcaC05g29600 Brassica carinata HOM05D004172 ORTHO05D006010 9.6e-296 1019.6 597 89.9
Aa31LG5G18700 Aethionema arabicum HOM05D004172 ORTHO05D006010 2.4e-294 1015.0 597 88.4
THA.LOC104823330 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 2.4e-278 961.8 596 83.4
MD12G1192900 Malus domestica HOM05D004172 ORTHO05D006010 1.0e-257 893.3 592 79.1
Manes.09G122000 Manihot esculenta HOM05D004172 ORTHO05D006010 1.8e-257 892.5 596 77.0
Medtr7g074060 Medicago truncatula HOM05D004172 ORTHO05D006010 1.2e-256 889.8 590 77.3
Prupe.6G297500 Prunus persica HOM05D004172 ORTHO05D006010 1.5e-256 889.4 593 78.8
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 3.3e-256 888.3 599 78.1
CANSAT55G0003 Cannabis sativa HOM05D004172 ORTHO05D006010 6.3e-255 884.0 592 78.2
MD04G1177600 Malus domestica HOM05D004172 ORTHO05D006010 6.3e-255 884.0 596 78.2
Psat3g117200 Pisum sativum HOM05D004172 ORTHO05D006010 6.3e-255 884.0 592 76.7
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 3.1e-254 881.7 591 78.7
THA.LOC104806653 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 4.1e-254 881.3 587 76.5
Thecc.04G148100 Theobroma cacao HOM05D004172 ORTHO05D006010 4.1e-254 881.3 594 77.4
Glyma.18G217100 Glycine max HOM05D004172 ORTHO05D006010 7.0e-254 880.6 591 76.8
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 1.6e-253 879.4 591 78.5
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.6e-253 879.4 591 78.7
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 2.0e-253 879.0 591 77.3
Manes.08G168300 Manihot esculenta HOM05D004172 ORTHO05D006010 3.5e-253 878.2 591 75.6
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 5.9e-253 877.5 591 78.2
Lj1g0013582 Lotus japonicus HOM05D004172 ORTHO05D006010 1.3e-252 876.3 591 76.3
Ca_07790_v3 Cicer arietinum L. HOM05D004172 ORTHO05D006010 5.0e-252 874.4 592 75.5
Phvul.008G079500 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 5.0e-252 874.4 589 76.1
TWI53G0780 Tripterygium wilfordii HOM05D004172 ORTHO05D006010 8.5e-252 873.6 596 76.8
Glyma.09G271900 Glycine max HOM05D004172 ORTHO05D006010 2.5e-251 872.1 591 76.3
Duzib151G0210 Durio zibethinus HOM05D004172 ORTHO05D006010 3.2e-251 871.7 590 76.3
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 1.2e-250 869.8 592 75.2
Ciclev10011331m.g Citrus clementina HOM05D004172 ORTHO05D006010 1.2e-250 869.8 589 76.7
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 3.6e-250 868.2 588 75.0
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 1.4e-249 866.3 592 75.7
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 1.8e-249 865.9 592 76.2
Dinv16944 Davidia involucrata HOM05D004172 ORTHO05D006010 3.0e-249 865.1 593 75.5
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 4.0e-249 864.8 591 76.0
Gorai.011G125600 Gossypium raimondii HOM05D004172 ORTHO05D006010 6.8e-249 864.0 591 76.0
Lalb_Chr07g0195761 Lupinus albus HOM05D004172 ORTHO05D006010 6.8e-249 864.0 591 75.1
PGR004G2490 Punica granatum HOM05D004172 ORTHO05D006010 1.2e-248 863.2 592 76.2
Gohir.A10G152400 Gossypium hirsutum HOM05D004172 ORTHO05D006010 2.0e-248 862.4 591 75.6
Gohir.D10G113800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 2.0e-248 862.4 591 75.5
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 3.4e-248 861.7 594 75.9
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 3.4e-248 861.7 591 76.0
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 7.5e-248 860.5 592 74.8
CsaV3_4G027360 Cucumis sativus L. HOM05D004172 ORTHO05D006010 1.3e-247 859.8 591 75.8
Gohir.A02G001800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 1.3e-247 859.8 594 76.1
Potri.006G111200 Populus trichocarpa HOM05D004172 ORTHO05D006010 1.3e-247 859.8 592 75.8
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 1.3e-247 859.8 594 75.9
Cfa017003 Carpinus fangiana HOM05D004172 ORTHO05D006010 2.2e-247 859.0 596 74.8
TPR.G24292 Trifolium pratense HOM05D004172 ORTHO05D006010 2.2e-247 859.0 594 74.7
Atru.chr8.66 Acer truncatum HOM05D004172 ORTHO05D006010 1.1e-246 856.7 592 75.7
ClCG04G006210 Citrullus lanatus HOM05D004172 ORTHO05D006010 7.0e-246 854.0 591 75.5
Gohir.D02G002100 Gossypium hirsutum HOM05D004172 ORTHO05D006010 7.0e-246 854.0 594 75.4
Gorai.005G002600 Gossypium raimondii HOM05D004172 ORTHO05D006010 1.2e-245 853.2 594 75.4
MELO3C025255.2 Cucumis melo HOM05D004172 ORTHO05D006010 2.7e-245 852.0 591 75.3
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla HOM05D004172 ORTHO05D006010 6.6e-244 847.4 590 73.4
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 3.3e-243 845.1 590 73.9
CSS0013897 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 4.2e-243 844.7 591 74.5
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 5.5e-243 844.3 591 74.5
Rhsim04G0120600 Rhododendron simsii HOM05D004172 ORTHO05D006010 1.2e-240 836.6 591 73.9
Phvul.010G059200 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 2.6e-240 835.5 590 73.6
Sabra04G0157100 Salix brachista HOM05D004172 ORTHO05D006010 1.7e-239 832.8 627 71.1
Peaxi162Scf00019g00011 Petunia axillaris HOM05D004172 ORTHO05D006010 2.8e-239 832.0 600 72.0
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 1.1e-238 830.1 566 75.8
PGSC0003DMG400006857 Solanum tuberosum HOM05D004172 ORTHO05D006010 1.1e-238 830.1 590 73.1
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 3.1e-238 828.6 588 73.0
Solyc01g087530.3 Solanum lycopersicum HOM05D004172 ORTHO05D006010 4.1e-238 828.2 590 72.9
Sopen01g034500 Solanum pennellii HOM05D004172 ORTHO05D006010 1.6e-237 826.2 590 72.5
Haze_21203 Corylus avellana HOM05D004172 ORTHO05D006010 4.5e-237 824.7 695 64.3
Nitab4.5_0000707g0290 Nicotiana tabacum HOM05D004172 ORTHO05D006010 5.9e-237 824.3 576 73.8
Nitab4.5_0006228g0020 Nicotiana tabacum HOM05D004172 ORTHO05D006010 6.6e-236 820.8 570 74.2
MSTRG.5032 Avicennia marina HOM05D004172 ORTHO05D006010 1.1e-235 820.1 591 71.2
Sabra06G0086400 Salix brachista HOM05D004172 ORTHO05D006010 1.9e-235 819.3 696 64.1
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 3.3e-235 818.5 590 72.9
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 4.3e-235 818.1 591 72.8
Nn5g26794 Nelumbo nucifera HOM05D004172 ORTHO05D006010 7.3e-235 817.4 569 74.5
CAN.G219.48 Capsicum annuum HOM05D004172 ORTHO05D006010 1.0e-233 813.5 592 71.5
Lj7P587T8 Lonicera japonica HOM05D004172 ORTHO05D006010 1.8e-233 812.8 588 71.6
GSVIVG01029868001 Vitis vinifera HOM05D004172 ORTHO05D006010 4.0e-233 811.6 509 80.0
Oeu006559.1 Olea europaea HOM05D004172 ORTHO05D006010 9.8e-232 807.0 612 70.1
Aqoxy4G03306 Aquilegia oxysepala HOM05D004172 ORTHO05D006010 2.4e-230 802.4 592 71.1
Migut.N01780 Erythranthe guttata HOM05D004172 ORTHO05D006010 2.4e-230 802.4 589 71.5
DCAR_029461 Daucus carota HOM05D004172 ORTHO05D006010 4.1e-230 801.6 596 71.3
TAR633G1329 Trochodendron aralioides HOM05D004172 ORTHO05D006010 6.0e-229 797.7 567 73.4
MBI15_g31039_MAGBIO Magnolia biondii HOM05D004172 ORTHO05D006010 1.1e-227 793.5 592 71.3
Actinidia20804 Actinidia chinensis HOM05D004172 ORTHO05D006010 2.8e-226 788.9 591 71.4
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 1.1e-225 786.9 591 69.4
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 2.0e-224 782.7 591 68.7
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 3.7e-223 778.5 591 68.2
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 1.1e-222 776.9 591 68.2
Oeu049006.1 Olea europaea HOM05D004172 ORTHO05D006010 2.4e-222 775.8 598 69.4
PSO017G1041 Papaver somniferum HOM05D004172 ORTHO05D006010 3.2e-222 775.4 574 72.0
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 4.1e-222 775.0 593 68.1
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 6.0e-221 771.2 600 67.2
PSO170G1455 Papaver somniferum HOM05D004172 ORTHO05D006010 6.0e-221 771.2 574 71.3
Cc02_g28240 Coffea canephora HOM05D004172 ORTHO05D006010 9.5e-219 763.8 512 75.2
PSO502G0022 Papaver somniferum HOM05D004172 ORTHO05D006010 1.6e-218 763.1 574 70.7
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 6.4e-215 751.1 565 70.8
TAR636G0443 Trochodendron aralioides HOM05D004172 ORTHO05D006010 1.4e-214 750.0 602 67.1
SHI12946 Sapria himalayana HOM05D004172 ORTHO05D006010 2.3e-212 742.7 586 66.4
CDE09G1233 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 3.3e-211 738.8 580 67.2
Os05g0316100 Oryza sativa ssp. japonica HOM05D004172 ORTHO05D006010 2.1e-210 736.1 587 67.3
HPP92_026424 Vanilla planifolia HOM05D004172 ORTHO05D006010 3.9e-204 715.3 591 64.3
C03p44040 Brassica napus HOM05D004172 ORTHO05D006010 1.4e-198 696.8 382 94.0
Lsat_1_v5_gn_1_105840 Lactuca sativa HOM05D004172 ORTHO05D006010 1.4e-198 696.8 600 63.2
Potri.016G140500 Populus trichocarpa HOM05D004172 ORTHO05D006010 7.3e-195 684.5 589 63.2
BraA01t04334Z Brassica rapa HOM05D004172 ORTHO05D006010 1.1e-193 680.6 372 94.9
Zm00001eb408330 Zea mays HOM05D004172 ORTHO05D006010 3.4e-192 675.6 531 68.5
unitig_747.g21293 Utricularia gibba HOM05D004172 ORTHO05D006010 7.9e-181 637.9 476 70.8
CDE08G0114 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 6.2e-178 628.2 448 72.1
HanXRQChr01g0016071 Helianthus annuus HOM05D004172 ORTHO05D006010 9.3e-174 614.4 434 74.2
SEGI_23896 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 5.7e-171 605.1 479 66.8
vmacro08954 Vaccinium macrocarpon HOM05D004172 ORTHO05D006010 1.4e-166 590.5 508 64.8
SMO337G0001 Selaginella moellendorffii HOM05D004172 ORTHO05D006010 1.0e-164 584.3 542 60.1
Pp3c6_18720 Physcomitrium patens HOM05D004172 ORTHO05D006010 1.4e-140 504.2 520 52.9
CiPaw.09G223100 Carya illinoinensis HOM05D004172 ORTHO05D006010 2.6e-139 500.0 571 54.3
SGA_v2.0_scaffold5G02963 Striga asiatica HOM05D004172 ORTHO05D006010 2.7e-128 463.4 322 75.5
Actinidia32576 Actinidia chinensis HOM05D004172 ORTHO05D006010 6.1e-125 452.2 401 63.1
BcaB04g18578 Brassica carinata HOM05D004172 ORTHO05D006010 3.7e-114 416.4 291 75.3
COL.COLO4_05675 Corchorus olitorius HOM05D004172 ORTHO05D006010 2.4e-113 413.7 252 82.9
CSS0016172 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 1.6e-112 411.0 359 63.2
Mapoly0092s0078 Marchantia polymorpha HOM05D004172 ORTHO05D006010 2.0e-112 410.6 514 48.1
C03p44050 Brassica napus HOM05D004172 ORTHO05D006010 9.2e-105 385.2 210 94.3
CBR_g164 Chara braunii HOM05D004172 ORTHO05D006010 2.2e-98 364.0 556 43.2
Actinidia28546 Actinidia chinensis HOM05D004172 ORTHO05D006010 2.6e-83 313.9 229 72.5
SEGI_22351 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.6e-77 294.7 220 70.5
MCO09G526 Micromonas commoda HOM05D004172 ORTHO05D006010 1.9e-65 254.6 258 53.5
Cre06.g281900 Chlamydomonas reinhardtii HOM05D004172 ORTHO05D006010 6.5e-58 229.6 346 38.7
Medtr3g094870 Medicago truncatula HOM05D004172 ORTHO05D006010 1.4e-49 201.8 129 78.3
PRCOL_00003523 Prasinoderma coloniale HOM05D004172 ORTHO05D006010 2.3e-47 194.5 266 44.7
CSS0001306 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D000002 2.3e-39 167.9 129 65.9
HanXRQChr04g0127351 Helianthus annuus HOM05D004172 ORTHO05D006010 2.6e-30 137.9 137 56.2
BcaC02g10326 Brassica carinata HOM05D004172 ORTHO05D023965 2.8e-29 134.4 92 81.5
RcHm_v2.0_Chr3g0459981 Rosa chinensis HOM05D004172 ORTHO05D018193 1.0e-26 125.9 112 61.6
C04p30290 Brassica napus HOM05D004172 ORTHO05D023965 4.7e-24 117.1 70 90.0
BolC4t24562H Brassica oleracea HOM05D004172 ORTHO05D023965 4.7e-24 117.1 70 90.0
RcHm_v2.0_Chr3g0460031 Rosa chinensis HOM05D004172 ORTHO05D018193 2.3e-23 114.8 110 59.1
C01p21620 Brassica napus HOM05D004172 ORTHO05D023965 3.0e-23 114.4 70 90.0
QL07p004777 Quercus lobata HOM05D004172 ORTHO05D039478 3.4e-22 110.9 188 42.6
SEGI_04146 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 3.1e-20 104.4 206 39.8
C02p50100 Brassica napus HOM05D004172 ORTHO05D018193 5.0e-18 97.1 52 94.2
BolC2t11086H Brassica oleracea HOM05D004172 ORTHO05D018193 5.0e-18 97.1 52 94.2
BcaC09g50722 Brassica carinata HOM05D004172 ORTHO05D023965 1.9e-17 95.1 68 80.9
Actinidia32575 Actinidia chinensis HOM05D004172 ORTHO05D006010 5.5e-17 93.6 50 82.0
BcaC07g38378 Brassica carinata HOM05D004172 ORTHO05D039478 1.5e-14 85.5 51 74.5
HanXRQChr11g0335241 Helianthus annuus HOM05D004172 ORTHO05D006010 7.5e-14 83.2 52 82.7
SEGI_20309 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 3.7e-13 80.9 71 60.6
C03p65240 Brassica napus HOM05D004172 ORTHO05D018193 9.5e-09 66.2 30 100.0
BolC3t18777H Brassica oleracea HOM05D004172 ORTHO05D018193 9.5e-09 66.2 30 100.0
TAR633G1452 Trochodendron aralioides HOM05D004172 ORTHO05D414170 2.1e-08 65.1 57 56.1
Actinidia28545 Actinidia chinensis HOM05D004172 ORTHO05D018193 8.9e-07 59.7 91 47.3
BcaC05g28200 Brassica carinata HOM05D004381 ORTHO05D005200 1.5e-06 58.9 240 28.3
COL.COLO4_16027 Corchorus olitorius HOM05D004172 ORTHO05D159660 1.5e-06 58.9 51 68.6


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