Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.7e-128 462.6 226 100.0
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.1e-109 398.7 226 85.4
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 2.7e-105 385.6 221 85.5
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 3.3e-103 378.6 232 81.9
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.6e-102 375.2 226 81.4
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 8.3e-99 364.0 225 79.1
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 4.1e-98 361.7 225 78.2
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.6e-97 359.8 225 78.2
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 1.6e-97 359.8 225 78.7
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 3.3e-95 352.1 225 78.7
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.7e-88 329.7 234 70.9
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 5.1e-88 328.2 232 67.7
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.1e-66 257.3 218 56.9
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 2.7e-65 252.7 219 56.2
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 3.3e-63 245.7 218 57.8
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 7.4e-63 244.6 219 54.3
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 8.1e-62 241.1 223 52.9
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.1e-61 240.7 220 55.0
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.4e-61 240.4 225 56.4
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.8e-61 240.0 221 56.1
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 2.4e-61 239.6 221 52.0
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.4e-61 239.6 218 53.7
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 3.1e-61 239.2 220 52.7
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.0e-60 236.5 222 51.4
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 2.6e-60 236.1 222 54.1
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.5e-60 235.3 218 54.6
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 7.6e-60 234.6 224 54.9
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.0e-59 234.2 223 56.1
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.7e-59 233.4 221 54.3
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 3.8e-59 232.3 219 53.0
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 4.9e-59 231.9 218 54.1
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.4e-58 230.3 220 51.4
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.4e-58 230.3 223 52.0
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.4e-58 230.3 219 55.3
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.9e-58 229.9 227 52.9
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.9e-58 229.9 221 52.0
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 3.2e-58 229.2 217 52.5
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.2e-58 228.8 223 52.0
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 4.2e-58 228.8 220 52.7
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 5.5e-58 228.4 220 53.2
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.2e-57 227.3 219 53.4
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.6e-57 226.9 220 53.6
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.1e-57 226.5 228 48.2
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.7e-57 226.1 231 50.2
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.5e-57 225.7 231 50.6
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 7.9e-57 224.6 221 53.8
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.3e-56 223.8 220 53.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 6.7e-56 221.5 223 53.4
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.9e-55 219.9 219 50.7
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.5e-55 219.5 222 50.0
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 4.3e-55 218.8 223 50.7
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 4.3e-55 218.8 225 51.6
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 9.6e-55 217.6 203 54.7
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 1.3e-54 217.2 221 50.2
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 2.1e-54 216.5 218 51.8
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.1e-53 214.2 222 50.5
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.4e-53 213.8 222 49.1
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 4.1e-53 212.2 219 49.8
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.4e-52 209.1 218 47.2
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 5.8e-52 208.4 221 49.8
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 5.8e-52 208.4 222 48.6
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 7.6e-52 208.0 222 50.9
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.0e-51 207.6 221 49.8
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.0e-51 207.6 227 47.1
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.0e-51 207.6 218 46.3
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.9e-51 206.1 218 45.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 3.8e-51 205.7 220 49.5
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 6.5e-51 204.9 236 48.3
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.4e-50 203.8 224 46.9
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 2.5e-50 203.0 224 45.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 3.2e-50 202.6 226 46.0
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 9.3e-50 201.1 227 48.9
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.2e-49 200.7 140 65.7
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.6e-49 200.3 218 46.3
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.1e-49 199.9 215 47.4
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 2.7e-49 199.5 247 44.1
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 3.5e-49 199.1 226 45.1
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 6.1e-49 198.4 224 46.4
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 3.0e-48 196.1 221 42.5
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 6.7e-48 194.9 246 44.3
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.9e-47 193.4 140 64.3
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 9.7e-47 191.0 219 44.7
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 9.7e-47 191.0 185 53.0
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 4.8e-46 188.7 227 44.1
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 8.2e-46 188.0 174 56.9
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.1e-45 187.6 221 44.3
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 7.7e-44 181.4 223 43.9
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 2.9e-43 179.5 131 63.4
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 7.2e-42 174.9 221 44.3
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.1e-41 173.3 173 52.6
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 1.4e-40 170.6 223 42.2
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 3.3e-39 166.0 251 40.6
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 3.6e-33 146.0 117 56.4
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 6.1e-33 145.2 157 47.1
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.6e-28 130.6 97 59.8
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 3.2e-26 122.9 186 36.0
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.6e-25 120.6 181 37.6
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.4e-24 117.5 193 38.3
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 6.7e-24 115.2 123 49.6
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 8.8e-24 114.8 123 47.2
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 2.6e-23 113.2 105 61.0
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 3.3e-23 112.8 106 59.4
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.3e-22 110.9 150 43.3
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.6e-20 104.0 81 56.8
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.6e-17 92.8 196 34.2
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 5.7e-15 85.5 61 60.7
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.7e-14 84.0 148 37.8
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 4.5e-12 75.9 221 26.7
BcaC06g35868 Brassica carinata HOM05D000032 ORTHO05D027530 1.7e-11 73.9 67 61.2
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.0e-08 64.7 93 45.2
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 3.0e-08 63.2 88 44.3
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.0e-08 63.2 91 36.3
BolC7t41477H Brassica oleracea HOM05D000032 ORTHO05D027530 1.2e-07 61.2 69 49.3
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 2.2e-06 57.0 68 44.1


User provided reference genes

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