Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 7.0e-84 313.9 160 100.0
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 7.0e-84 313.9 160 100.0
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.8e-82 308.1 160 97.5
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 2.6e-78 295.4 164 92.7
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 4.4e-78 294.7 165 92.1
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 5.0e-74 281.2 161 88.8
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.1e-73 280.0 163 86.5
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.5e-73 279.6 162 89.5
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 8.9e-71 270.4 160 88.1
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 8.9e-71 270.4 160 88.8
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 8.9e-71 270.4 160 88.1
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 8.9e-71 270.4 160 88.1
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 3.7e-69 265.0 160 83.1
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 5.4e-68 261.2 167 80.2
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 9.8e-62 240.4 159 75.5
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.7e-61 238.4 158 74.7
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.4e-61 237.7 158 74.7
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 8.3e-61 237.3 159 74.8
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.1e-60 236.9 160 75.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.4e-60 236.5 164 73.8
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 1.4e-60 236.5 164 74.4
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.4e-60 235.7 158 74.1
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 9.2e-60 233.8 162 72.2
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 1.2e-59 233.4 159 75.5
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.6e-59 233.0 160 73.8
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 7.8e-59 230.7 161 72.7
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.0e-58 230.3 161 71.4
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.3e-58 229.9 158 72.2
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 3.0e-58 228.8 164 72.6
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.9e-58 228.4 158 71.5
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 8.6e-58 227.3 156 75.0
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.5e-57 226.5 156 70.5
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.5e-57 226.5 161 71.4
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.5e-57 226.5 159 72.3
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.5e-57 226.5 157 75.2
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.9e-57 226.1 157 70.7
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.9e-57 226.1 160 71.9
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.9e-57 226.1 160 71.9
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 3.3e-57 225.3 161 69.6
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 3.3e-57 225.3 162 71.0
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 4.3e-57 224.9 162 71.6
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.3e-57 224.9 157 70.1
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.3e-57 224.9 157 70.1
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 5.6e-57 224.6 156 70.5
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.2e-56 223.4 159 71.7
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 1.2e-56 223.4 159 68.6
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.6e-56 223.0 161 68.9
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.1e-56 222.6 150 70.7
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.8e-56 222.2 160 71.2
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 4.7e-56 221.5 158 70.9
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 6.2e-56 221.1 159 69.8
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 6.2e-56 221.1 159 73.0
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 8.1e-56 220.7 157 68.8
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.4e-55 219.9 159 69.8
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.4e-55 219.9 157 73.9
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.8e-55 219.5 161 68.9
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 2.3e-55 219.2 163 72.4
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 6.8e-55 217.6 156 69.9
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 8.9e-55 217.2 164 67.1
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.2e-54 216.9 161 68.3
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.2e-54 216.9 156 70.5
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 2.6e-54 215.7 160 69.4
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 3.4e-54 215.3 155 70.3
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 9.9e-54 213.8 159 71.1
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.7e-53 213.0 160 67.5
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 2.2e-53 212.6 162 67.9
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.2e-53 212.6 160 70.0
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.9e-53 212.2 156 69.2
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.9e-53 212.2 155 69.0
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 3.7e-53 211.8 158 65.8
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 6.4e-53 211.1 156 68.6
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 6.4e-53 211.1 121 81.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 6.4e-53 211.1 121 81.0
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.4e-52 209.9 159 70.4
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 1.4e-52 209.9 156 70.5
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.4e-52 209.9 121 81.0
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 1.9e-52 209.5 162 66.7
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.4e-52 209.1 156 71.2
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 2.4e-52 209.1 161 67.1
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 2.4e-52 209.1 156 67.9
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.1e-52 208.4 160 67.5
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.1e-52 208.4 160 68.1
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 5.4e-52 208.0 162 66.0
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 5.4e-52 208.0 156 69.2
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.4e-52 208.0 160 67.5
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 2.7e-51 205.7 156 64.7
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.7e-51 205.7 156 66.7
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.0e-50 203.8 157 65.6
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 3.9e-50 201.8 156 63.5
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.1e-50 201.4 161 64.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 5.1e-50 201.4 160 62.5
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 6.6e-50 201.1 142 71.1
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.5e-49 199.9 131 71.0
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 3.3e-49 198.7 155 62.6
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 4.3e-49 198.4 155 65.2
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 7.3e-49 197.6 156 63.5
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 9.5e-49 197.2 164 61.6
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 1.2e-48 196.8 137 67.9
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.6e-48 196.4 150 66.0
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.6e-48 196.4 149 65.1
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 3.6e-48 195.3 157 65.0
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 6.2e-48 194.5 158 63.3
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.1e-47 193.7 153 62.7
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 2.0e-46 189.5 157 62.4
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.2e-45 186.0 164 64.0
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 4.2e-44 181.8 119 71.4
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.5e-41 173.3 140 63.6
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 2.8e-40 169.1 152 59.9
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 2.8e-40 169.1 108 84.3
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.1e-39 167.2 139 60.4
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.4e-37 157.9 91 82.4
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 8.7e-34 147.5 120 56.7
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 5.3e-31 138.3 155 44.5
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.3e-29 133.7 90 74.4
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 6.4e-29 131.3 90 73.3
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 7.1e-28 127.9 82 73.2
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 9.3e-28 127.5 77 72.7
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.1e-25 120.6 143 45.5
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.6e-19 100.1 74 64.9
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 2.8e-16 89.4 49 83.7
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 6.2e-16 88.2 164 44.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 6.2e-16 88.2 49 85.7
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 6.2e-16 88.2 138 39.1
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.9e-13 78.6 118 36.4
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.5e-09 66.2 133 33.8


User provided reference genes

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