Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 3.5e-55 218.0 107 100.0
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 1.7e-49 199.1 105 93.3
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 3.2e-48 194.9 107 87.9
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 8.6e-46 186.8 93 95.7
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 8.4e-41 170.2 105 79.0
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 1.4e-40 169.5 105 79.0
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 7.1e-40 167.2 105 77.1
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 7.1e-40 167.2 105 77.1
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 6.0e-39 164.1 104 75.0
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 2.3e-38 162.2 104 74.0
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 2.3e-38 162.2 104 74.0
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 3.9e-38 161.4 104 74.0
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 6.2e-36 154.1 104 69.2
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 6.2e-36 154.1 95 76.8
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.1e-35 153.3 76 93.4
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 5.4e-32 141.0 88 78.4
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 2.3e-30 135.6 96 66.7
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 3.0e-30 135.2 95 62.1
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 3.9e-30 134.8 94 59.6
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 3.9e-30 134.8 93 63.4
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 3.9e-30 134.8 100 60.0
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 5.1e-30 134.4 100 61.0
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 5.1e-30 134.4 100 60.0
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 1.1e-29 133.3 100 60.0
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 1.5e-29 132.9 109 62.4
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 1.9e-29 132.5 93 61.3
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 1.9e-29 132.5 103 56.3
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 2.5e-29 132.1 104 59.6
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 2.5e-29 132.1 103 59.2
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 2.5e-29 132.1 93 60.2
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 3.3e-29 131.7 103 63.1
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 4.3e-29 131.3 93 64.5
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 5.6e-29 131.0 101 56.4
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 5.6e-29 131.0 93 60.2
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 5.6e-29 131.0 99 59.6
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 9.6e-29 130.2 93 63.4
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 9.6e-29 130.2 93 59.1
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 1.3e-28 129.8 102 57.8
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 2.1e-28 129.0 103 55.3
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 2.1e-28 129.0 93 62.4
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 3.6e-28 128.3 106 57.5
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 4.8e-28 127.9 84 65.5
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 4.8e-28 127.9 96 61.5
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 6.2e-28 127.5 93 61.3
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 6.2e-28 127.5 93 61.3
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 6.2e-28 127.5 99 57.6
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 1.1e-27 126.7 93 59.1
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 1.4e-27 126.3 93 59.1
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 1.4e-27 126.3 95 61.1
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.8e-27 125.9 93 60.2
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.8e-27 125.9 93 60.2
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 1.8e-27 125.9 96 59.4
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.1e-27 125.2 100 58.0
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 4.0e-27 124.8 93 59.1
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 5.3e-27 124.4 105 56.2
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 5.3e-27 124.4 92 60.9
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 5.3e-27 124.4 96 56.2
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 6.9e-27 124.0 94 58.5
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 9.0e-27 123.6 100 57.0
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 9.0e-27 123.6 93 59.1
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.5e-26 122.9 94 58.5
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 2.0e-26 122.5 93 58.1
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 2.6e-26 122.1 93 57.0
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 2.6e-26 122.1 93 55.9
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 4.5e-26 121.3 86 61.6
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 4.5e-26 121.3 102 55.9
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 5.8e-26 120.9 102 53.9
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 5.8e-26 120.9 94 54.3
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 7.6e-26 120.6 75 65.3
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 7.6e-26 120.6 92 58.7
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 7.6e-26 120.6 93 55.9
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 7.6e-26 120.6 95 54.7
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 9.9e-26 120.2 94 52.1
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 9.9e-26 120.2 91 58.2
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.3e-25 119.8 90 56.7
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 1.7e-25 119.4 99 52.5
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 1.7e-25 119.4 75 64.0
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 2.2e-25 119.0 95 57.9
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 3.8e-25 118.2 75 64.0
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 4.9e-25 117.9 75 64.0
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 4.9e-25 117.9 75 64.0
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 4.9e-25 117.9 75 64.0
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 6.4e-25 117.5 75 65.3
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 6.4e-25 117.5 75 64.0
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 6.4e-25 117.5 90 53.3
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 8.4e-25 117.1 98 55.1
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 8.4e-25 117.1 91 57.1
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 1.1e-24 116.7 75 66.7
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 1.4e-24 116.3 95 51.6
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 1.9e-24 115.9 75 65.3
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 1.9e-24 115.9 75 65.3
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 1.9e-24 115.9 75 65.3
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 2.4e-24 115.5 75 62.7
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 2.4e-24 115.5 74 63.5
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 2.4e-24 115.5 93 54.8
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 4.2e-24 114.8 93 53.8
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 5.4e-24 114.4 112 50.9
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 7.1e-24 114.0 76 64.5
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 9.3e-24 113.6 99 53.5
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 1.2e-23 113.2 84 58.3
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 1.6e-23 112.8 91 52.7
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 2.1e-23 112.5 94 55.3
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 2.1e-23 112.5 94 55.3
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 5.1e-22 107.8 92 55.4
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 4.3e-21 104.8 78 57.7
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 4.8e-20 101.3 74 55.4
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 6.2e-20 100.9 103 45.6
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 1.4e-19 99.8 74 54.1
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 7.6e-18 94.0 73 57.5
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.7e-17 92.8 95 50.5
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.7e-17 92.8 95 50.5
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 4.9e-17 91.3 59 64.4
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 2.3e-14 82.4 92 37.0
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 2.1e-12 75.9 92 37.0
Dinv44234 Davidia involucrata HOM05D000090 ORTHO05D001584 1.3e-06 56.6 93 38.7
Sc17g0001710 Simmondsia chinensis HOM05D001848 ORTHO05D001295 2.3e-06 55.8 106 34.0
Glyma.20G248700 Glycine max HOM05D001848 ORTHO05D001295 3.0e-06 55.5 63 39.7
MD11G1207300 Malus domestica HOM05D001848 ORTHO05D001295 6.7e-06 54.3 57 42.1


User provided reference genes

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