Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G06600 Arabidopsis thaliana HOM05D011548 ORTHO05D013687 2.3e-97 359.0 194 100.0
AL3G17650 Arabidopsis lyrata HOM05D011548 ORTHO05D013687 5.3e-86 321.2 195 90.3
Carub.0003s0606 Capsella rubella HOM05D011548 ORTHO05D013687 5.9e-77 291.2 195 84.6
Thhalv10022295m.g Eutrema salsugineum HOM05D011548 ORTHO05D013687 1.2e-69 266.9 194 76.8
Sp3g05530 Schrenkiella parvula HOM05D011548 ORTHO05D013687 2.7e-69 265.8 194 74.2
CARHR081140 Cardamine hirsuta HOM05D011548 ORTHO05D013687 2.7e-66 255.8 195 74.4
BcaC05g30545 Brassica carinata HOM05D011548 ORTHO05D013687 1.5e-59 233.4 195 70.8
BolC1t05600H Brassica oleracea HOM05D011548 ORTHO05D013687 9.4e-59 230.7 196 68.9
BcaC09g47906 Brassica carinata HOM05D011548 ORTHO05D013687 1.4e-57 226.9 196 68.9
BraA01t04429Z Brassica rapa HOM05D011548 ORTHO05D013687 3.0e-57 225.7 195 68.7
Aa31LG5G17160 Aethionema arabicum HOM05D011548 ORTHO05D013687 3.4e-56 222.2 194 63.9
THA.LOC104818879 Tarenaya hassleriana HOM05D011548 ORTHO05D013687 1.6e-45 186.8 194 56.2
BraA05t22865Z Brassica rapa HOM05D011548 ORTHO05D013687 1.6e-42 176.8 196 57.1
A05p41440 Brassica napus HOM05D011548 ORTHO05D013687 2.8e-42 176.0 198 58.1
BolC5t34724H Brassica oleracea HOM05D011548 ORTHO05D013687 8.9e-41 171.0 195 56.9
C05p60650 Brassica napus HOM05D011548 ORTHO05D013687 4.9e-39 165.2 195 55.9
BNapus_Darmor_BZH_scaffold_118p00030 Brassica napus HOM05D003564 ORTHO05D001609 5.4e-14 82.0 75 61.3
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 7.6e-08 61.6 223 29.6
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 6.4e-07 58.5 225 31.1
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 1.1e-06 57.8 226 28.3


User provided reference genes

Program Settings