Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G05741 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.0e-97 358.6 191 100.0
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 5.8e-61 238.0 190 66.3
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.9e-40 169.9 190 47.9
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.2e-39 166.4 189 52.9
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 2.2e-36 156.4 189 46.0
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 4.2e-35 152.1 182 45.1
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 3.3e-32 142.5 184 44.6
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 1.7e-20 103.6 189 36.5
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 7.2e-19 98.2 190 34.2
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 2.1e-18 96.7 190 33.2
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 3.6e-18 95.9 190 32.1
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 6.1e-18 95.1 190 32.1
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 6.1e-18 95.1 163 35.0
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.3e-17 93.2 190 33.7
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.2e-17 92.0 190 31.6
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 8.8e-17 91.3 190 30.5
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.2e-16 90.9 190 31.6
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 2.6e-16 89.7 190 30.5
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 2.6e-16 89.7 190 30.5
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 5.7e-16 88.6 190 31.1
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 7.5e-16 88.2 190 31.1
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 9.7e-16 87.8 190 30.5
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.6e-13 80.5 190 29.5
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 2.7e-13 79.7 190 30.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.7e-12 77.0 145 30.3
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 2.5e-11 73.2 190 29.5
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 4.2e-11 72.4 156 32.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.6e-10 70.5 147 29.3
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 8.0e-10 68.2 188 25.5
Ciclev10010801m.g Citrus clementina HOM05D009438 ORTHO05D001819 1.0e-09 67.8 125 29.6
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 1.4e-09 67.4 151 27.2
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-07 58.9 144 26.4
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-07 58.9 144 26.4
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-07 58.9 144 26.4
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 8.3e-07 58.2 130 26.2
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 8.3e-07 58.2 150 22.0
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-06 57.4 97 29.9
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-06 57.4 98 32.7
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-06 57.4 167 25.7
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-06 57.4 167 25.7
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-06 57.0 97 29.9
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.8e-06 57.0 153 24.8
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.1e-06 55.8 97 28.9
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.1e-06 55.8 96 32.3
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.1e-06 55.8 96 32.3
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.4e-06 55.5 157 25.5
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.0e-06 55.1 97 28.9
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.0e-06 55.1 97 28.9
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-06 55.1 144 25.0
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-06 55.1 144 25.0
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-06 55.1 144 25.0
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-06 55.1 144 25.0
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-06 55.1 144 25.0
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 9.1e-06 54.7 113 22.1
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 9.1e-06 54.7 143 25.9


User provided reference genes

Program Settings