Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G05320 Arabidopsis thaliana HOM05D005187 ORTHO05D006321 2.3e-254 881.7 446 100.0
AL3G15760 Arabidopsis lyrata HOM05D005187 ORTHO05D006321 1.5e-245 852.4 446 95.7
Carub.0003s0459 Capsella rubella HOM05D005187 ORTHO05D006321 1.9e-232 808.9 447 91.5
Thhalv10020752m.g Eutrema salsugineum HOM05D005187 ORTHO05D006321 3.3e-224 781.6 446 88.1
Sp3g04180 Schrenkiella parvula HOM05D005187 ORTHO05D006321 1.8e-222 775.8 447 88.4
CARHR079660 Cardamine hirsuta HOM05D005187 ORTHO05D006321 4.3e-216 754.6 439 87.0
BcaC05g30138 Brassica carinata HOM05D005187 ORTHO05D006321 9.0e-214 746.9 444 85.4
BolC5t34850H Brassica oleracea HOM05D005187 ORTHO05D006321 1.3e-209 733.0 444 84.0
BNapus_Darmor_BZH_scaffold_114p00200 Brassica napus HOM05D005187 ORTHO05D006321 2.4e-206 722.2 445 81.8
BcaC05g30018 Brassica carinata HOM05D005187 ORTHO05D006321 3.1e-206 721.8 444 83.6
C05p61900 Brassica napus HOM05D005187 ORTHO05D006321 3.1e-206 721.8 444 83.6
BraSC132t45512Z Brassica rapa HOM05D005187 ORTHO05D006321 4.1e-206 721.5 444 82.4
BraA05t23022Z Brassica rapa HOM05D005187 ORTHO05D006321 4.2e-203 711.4 444 82.0
BolC1t05702H Brassica oleracea HOM05D005187 ORTHO05D006321 3.0e-201 705.3 444 81.5
Aa31LG9G15990 Aethionema arabicum HOM05D005187 ORTHO05D006321 7.4e-184 647.5 454 74.9
BcaB04g21454 Brassica carinata HOM05D005187 ORTHO05D006321 4.4e-176 621.7 367 85.3
THA.LOC104798549 Tarenaya hassleriana HOM05D005187 ORTHO05D006321 1.2e-168 597.0 462 68.6
THA.LOC104812708 Tarenaya hassleriana HOM05D005187 ORTHO05D006321 3.7e-167 592.0 468 67.5
Dinv11863 Davidia involucrata HOM05D005187 ORTHO05D006321 2.6e-160 569.3 448 66.7
A05p42310 Brassica napus HOM05D005187 ORTHO05D006321 5.7e-160 568.2 359 81.1
Ciclev10015216m.g Citrus clementina HOM05D005187 ORTHO05D006321 2.8e-159 565.8 461 65.9
Duzib235G1525 Durio zibethinus HOM05D005187 ORTHO05D006321 8.3e-159 564.3 458 66.4
Duzib160G0034 Durio zibethinus HOM05D005187 ORTHO05D006321 1.1e-158 563.9 444 66.2
Potri.012G118800 Populus trichocarpa HOM05D005187 ORTHO05D006321 1.1e-158 563.9 437 66.8
Potri.015G117500 Populus trichocarpa HOM05D005187 ORTHO05D006321 5.4e-158 561.6 455 65.1
Gorai.009G150500 Gossypium raimondii HOM05D005187 ORTHO05D006321 7.0e-158 561.2 457 63.2
Cfa000731 Carpinus fangiana HOM05D005187 ORTHO05D006321 9.2e-158 560.8 454 64.8
Thecc.06G138700 Theobroma cacao HOM05D005187 ORTHO05D006321 1.6e-157 560.1 440 66.6
COL.COLO4_30954 Corchorus olitorius HOM05D005187 ORTHO05D006321 2.0e-157 559.7 441 66.2
Gohir.D05G146700 Gossypium hirsutum HOM05D005187 ORTHO05D006321 3.5e-157 558.9 457 63.2
Eucgr.H03600 Eucalyptus grandis HOM05D005187 ORTHO05D006321 7.8e-157 557.8 435 65.7
TWI38G0211 Tripterygium wilfordii HOM05D005187 ORTHO05D006321 7.8e-157 557.8 456 62.9
QL11p018233 Quercus lobata HOM05D005187 ORTHO05D006321 2.3e-156 556.2 439 67.2
Prupe.4G108200 Prunus persica HOM05D005187 ORTHO05D006321 3.8e-156 555.4 456 65.1
TWI63G0482 Tripterygium wilfordii HOM05D005187 ORTHO05D006321 5.0e-156 555.1 458 63.8
Manes.16G047945 Manihot esculenta HOM05D005187 ORTHO05D006321 6.6e-156 554.7 451 65.4
Sabra12G0089800 Salix brachista HOM05D005187 ORTHO05D006321 8.6e-156 554.3 452 63.7
MD10G1236200 Malus domestica HOM05D005187 ORTHO05D006321 2.5e-155 552.7 456 64.3
CSS0021692 Camellia sinensis var. sinensis HOM05D005187 ORTHO05D006321 3.3e-155 552.4 442 64.5
TAR626G1727 Trochodendron aralioides HOM05D005187 ORTHO05D006321 4.3e-155 552.0 448 64.5
Oeu052680.1 Olea europaea HOM05D005187 ORTHO05D006321 1.6e-154 550.1 440 65.2
Atru.chr10.600 Acer truncatum HOM05D005187 ORTHO05D006321 3.6e-154 548.9 383 73.6
FvH4_3g11981 Fragaria vesca HOM05D005187 ORTHO05D006321 6.1e-154 548.1 435 64.8
Gohir.D06G145500 Gossypium hirsutum HOM05D005187 ORTHO05D006321 8.0e-154 547.7 435 66.0
RcHm_v2.0_Chr5g0019591 Rosa chinensis HOM05D005187 ORTHO05D006321 1.4e-153 547.0 435 65.5
CiPaw.09G079400 Carya illinoinensis HOM05D005187 ORTHO05D006321 1.8e-153 546.6 453 64.2
CSS0000605 Camellia sinensis var. sinensis HOM05D005187 ORTHO05D006321 2.3e-153 546.2 442 64.5
Gorai.010G169400 Gossypium raimondii HOM05D005187 ORTHO05D006321 2.3e-153 546.2 435 66.0
MD05G1256000 Malus domestica HOM05D005187 ORTHO05D006321 6.8e-153 544.7 456 62.5
Actinidia22378 Actinidia chinensis HOM05D005187 ORTHO05D006321 2.0e-152 543.1 441 64.6
Oeu060339.1 Olea europaea HOM05D005187 ORTHO05D006321 3.4e-152 542.3 427 64.9
FAN25G0172 Fragaria x ananassa HOM05D005187 ORTHO05D006321 5.8e-152 541.6 436 64.2
Sed0009778 Sechium edule HOM05D005187 ORTHO05D006321 7.5e-152 541.2 452 62.4
FAN21G3332 Fragaria x ananassa HOM05D005187 ORTHO05D006321 2.2e-151 539.7 435 63.9
Gohir.A06G141720 Gossypium hirsutum HOM05D005187 ORTHO05D006321 2.9e-151 539.3 435 64.8
Sed0019284 Sechium edule HOM05D005187 ORTHO05D006321 2.9e-151 539.3 439 63.6
PGR083G0195 Punica granatum HOM05D005187 ORTHO05D006321 4.9e-151 538.5 430 65.6
PSO541G0052 Papaver somniferum HOM05D005187 ORTHO05D006321 3.2e-150 535.8 469 61.4
Aqoxy3G04273 Aquilegia oxysepala HOM05D005187 ORTHO05D006321 5.4e-150 535.0 447 61.3
ClCG01G009120 Citrullus lanatus HOM05D005187 ORTHO05D006321 2.0e-149 533.1 440 63.2
MELO3C021805.2 Cucumis melo HOM05D005187 ORTHO05D006321 4.6e-149 531.9 386 67.6
arahy.Tifrunner.gnm1.ann1.U4TTSR Arachis hypogaea HOM05D005187 ORTHO05D006321 7.8e-149 531.2 434 63.1
Ca_18778_v3 Cicer arietinum L. HOM05D005187 ORTHO05D006321 7.8e-149 531.2 429 64.1
arahy.Tifrunner.gnm1.ann1.A8J5UB Arachis hypogaea HOM05D005187 ORTHO05D006321 3.0e-148 529.3 434 63.1
Lj4g0026916 Lotus japonicus HOM05D005187 ORTHO05D006321 3.0e-148 529.3 426 63.8
Glyma.07G223400 Glycine max HOM05D005187 ORTHO05D006321 5.0e-148 528.5 437 62.7
PGSC0003DMG401021153 Solanum tuberosum HOM05D005187 ORTHO05D006321 8.6e-148 527.7 439 64.0
Rhsim13G0129800 Rhododendron simsii HOM05D005187 ORTHO05D006321 4.3e-147 525.4 444 62.8
CANSAT35G0012 Cannabis sativa HOM05D005187 ORTHO05D006321 5.6e-147 525.0 437 63.2
CANSAT35G0393 Cannabis sativa HOM05D005187 ORTHO05D006321 5.6e-147 525.0 437 63.2
Glyma.15G126600 Glycine max HOM05D005187 ORTHO05D006321 7.3e-147 524.6 440 62.3
Lalb_Chr05g0219781 Lupinus albus HOM05D005187 ORTHO05D006321 9.5e-147 524.2 385 66.8
CsaV3_1G046490 Cucumis sativus L. HOM05D005187 ORTHO05D006321 2.1e-146 523.1 431 62.4
CSS0025112 Camellia sinensis var. sinensis HOM05D005187 ORTHO05D006321 2.8e-146 522.7 442 62.2
Cc01_g03360 Coffea canephora HOM05D005187 ORTHO05D006321 2.8e-146 522.7 448 61.8
Solyc02g069240.1 Solanum lycopersicum HOM05D005187 ORTHO05D006321 4.7e-146 521.9 441 63.5
CAN.G1202.10 Capsicum annuum HOM05D005187 ORTHO05D006321 8.0e-146 521.2 439 62.4
Peaxi162Scf00623g00041 Petunia axillaris HOM05D005187 ORTHO05D006321 8.0e-146 521.2 444 62.2
Phvul.006G131800 Phaseolus vulgaris HOM05D005187 ORTHO05D006321 1.4e-145 520.4 439 62.2
Glyma.09G020100 Glycine max HOM05D005187 ORTHO05D006321 3.1e-145 519.2 440 61.6
Sopen02g018400 Solanum pennellii HOM05D005187 ORTHO05D006321 5.2e-145 518.5 439 63.1
Lj6g0012614 Lotus japonicus HOM05D005187 ORTHO05D006321 6.8e-145 518.1 436 62.8
Ah.04g166250 Amaranthus hybridus HOM05D005187 ORTHO05D006321 1.2e-144 517.3 447 59.5
DCAR_003796 Daucus carota HOM05D005187 ORTHO05D006321 2.6e-144 516.2 453 61.1
Glyma.20G022800 Glycine max HOM05D005187 ORTHO05D006321 3.4e-144 515.8 441 61.7
VMungo0540G1318 Vigna mungo HOM05D005187 ORTHO05D006321 4.4e-144 515.4 439 60.6
Nitab4.5_0007051g0010 Nicotiana tabacum HOM05D005187 ORTHO05D006321 7.5e-144 514.6 442 61.5
MSTRG.14817 Avicennia marina HOM05D005187 ORTHO05D006321 1.7e-143 513.5 442 61.8
Lsat_1_v5_gn_9_40501 Lactuca sativa HOM05D005187 ORTHO05D006321 6.4e-143 511.5 443 63.4
Medtr4g083590 Medicago truncatula HOM05D005187 ORTHO05D006321 1.1e-142 510.8 428 62.6
TPR.G34067 Trifolium pratense HOM05D005187 ORTHO05D006321 1.1e-142 510.8 402 64.2
MSTRG.16334 Avicennia marina HOM05D005187 ORTHO05D006321 1.9e-142 510.0 447 62.0
Nitab4.5_0003027g0010 Nicotiana tabacum HOM05D005187 ORTHO05D006321 7.0e-142 508.1 435 61.8
Gohir.D10G046900 Gossypium hirsutum HOM05D005187 ORTHO05D006321 3.0e-140 502.7 451 61.0
Sabra15G0135700 Salix brachista HOM05D005187 ORTHO05D006321 3.0e-140 502.7 391 66.5
Sc26g0001200 Simmondsia chinensis HOM05D005187 ORTHO05D006321 3.9e-140 502.3 433 61.2
Psat1g169920 Pisum sativum HOM05D005187 ORTHO05D006321 6.6e-140 501.5 431 61.5
Gorai.011G050000 Gossypium raimondii HOM05D005187 ORTHO05D006321 8.6e-140 501.1 433 62.4
SGA_v2.0_scaffold298G47667 Striga asiatica HOM05D005187 ORTHO05D006321 2.5e-139 499.6 440 60.5
VMungo0540G1732 Vigna mungo HOM05D005187 ORTHO05D006321 4.3e-139 498.8 423 61.9
HanXRQChr05g0161551 Helianthus annuus HOM05D005187 ORTHO05D006321 9.5e-139 497.7 428 61.0
ATR0763G140 Amborella trichopoda HOM05D005187 ORTHO05D006321 1.6e-138 496.9 441 60.3
HanXRQChr05g0161561 Helianthus annuus HOM05D005187 ORTHO05D006321 2.1e-138 496.5 377 66.8
Medtr2g028900 Medicago truncatula HOM05D005187 ORTHO05D006321 6.2e-138 495.0 429 60.4
HanXRQChr11g0320061 Helianthus annuus HOM05D005187 ORTHO05D006321 4.0e-137 492.3 440 59.8
Lalb_Chr16g0385341 Lupinus albus HOM05D005187 ORTHO05D006321 5.2e-137 491.9 430 60.7
SHI14074 Sapria himalayana HOM05D005187 ORTHO05D006321 3.4e-136 489.2 423 59.3
HanXRQChr05g0152021 Helianthus annuus HOM05D005187 ORTHO05D006321 1.7e-135 486.9 438 59.4
Gohir.A05G144300 Gossypium hirsutum HOM05D005187 ORTHO05D006321 6.4e-135 485.0 357 66.4
CDE02G3842 Ceratophyllum demersum HOM05D005187 ORTHO05D006321 4.1e-134 482.3 444 58.1
Zm00001eb232980 Zea mays HOM05D005187 ORTHO05D006321 2.7e-133 479.6 452 56.4
unitig_32.g11673 Utricularia gibba HOM05D005187 ORTHO05D006321 1.7e-132 476.9 439 59.9
Lj1P1142T34 Lonicera japonica HOM05D005187 ORTHO05D006321 4.3e-131 472.2 348 67.0
Lj6g0019424 Lotus japonicus HOM05D005187 ORTHO05D006321 5.6e-131 471.9 436 58.9
Zm00001eb058010 Zea mays HOM05D005187 ORTHO05D006321 1.2e-130 470.7 452 56.2
Os02g0168500 Oryza sativa ssp. japonica HOM05D005187 ORTHO05D006321 2.6e-128 463.0 442 55.9
CSS0003379 Camellia sinensis var. sinensis HOM05D005187 ORTHO05D006321 4.6e-125 452.2 429 57.3
CSS0044498 Camellia sinensis var. sinensis HOM05D005187 ORTHO05D006321 4.6e-125 452.2 429 57.3
Phvul.006G131600 Phaseolus vulgaris HOM05D005187 ORTHO05D006321 7.8e-125 451.4 361 63.4
SalBow7G0111 Salvia bowleyana HOM05D005187 ORTHO05D006321 7.8e-125 451.4 348 67.0
MBI18_g43439_MAGBIO Magnolia biondii HOM05D005187 ORTHO05D006321 3.0e-124 449.5 359 63.2
HPP92_018360 Vanilla planifolia HOM05D005187 ORTHO05D006321 1.2e-120 437.6 426 54.9
Migut.H02421 Erythranthe guttata HOM05D005187 ORTHO05D006321 8.4e-119 431.4 445 55.3
Hma1.2p1_0868F.1_g230440 Hydrangea macrophylla HOM05D005187 ORTHO05D006321 3.3e-115 419.5 440 54.1
CDE05G2899 Ceratophyllum demersum HOM05D005187 ORTHO05D006321 6.2e-114 415.2 332 63.0
Nn7g38070 Nelumbo nucifera HOM05D005187 ORTHO05D006321 1.8e-113 413.7 326 65.3
Migut.K01171 Erythranthe guttata HOM05D005187 ORTHO05D006321 1.0e-100 371.3 442 49.1
MBI18_g45403_MAGBIO Magnolia biondii HOM05D005187 ORTHO05D006321 1.3e-100 370.9 378 54.8
Lsat_1_v5_gn_6_99661 Lactuca sativa HOM05D005187 ORTHO05D006321 1.8e-97 360.5 277 62.1
Lsat_1_v5_gn_8_151020 Lactuca sativa HOM05D005187 ORTHO05D006321 1.8e-97 360.5 277 62.1
SMO348G0028 Selaginella moellendorffii HOM05D005187 ORTHO05D006321 4.0e-97 359.4 387 51.7
SEGI_38166 Sequoiadendron giganteum HOM05D005187 ORTHO05D006321 1.4e-94 350.9 390 49.5
TPR.G17504 Trifolium pratense HOM05D005187 ORTHO05D006321 1.9e-70 270.8 228 59.2
Gorai.011G049800 Gossypium raimondii HOM05D005187 ORTHO05D006321 1.4e-68 264.6 244 58.6
SEGI_21451 Sequoiadendron giganteum HOM05D005187 ORTHO05D006321 1.0e-63 248.4 338 45.3
TPR.G17495 Trifolium pratense HOM05D005187 ORTHO05D006321 4.0e-60 236.5 197 65.0
GSVIVG01026258001 Vitis vinifera HOM05D005187 ORTHO05D006321 5.2e-60 236.1 161 68.3
C05p61880 Brassica napus HOM05D005187 ORTHO05D000598 2.6e-51 207.2 109 90.8
BolC5t34848H Brassica oleracea HOM05D000769 ORTHO05D000598 1.3e-50 204.9 110 90.0
BcaNung07272 Brassica carinata HOM05D005187 ORTHO05D006321 2.8e-50 203.8 147 74.1
RcHm_v2.0_Chr5g0019601 Rosa chinensis HOM05D005187 ORTHO05D006321 9.1e-49 198.7 263 44.9
SalBow3G3347 Salvia bowleyana HOM05D005187 ORTHO05D006321 4.2e-46 189.9 166 64.5
AUR62023945 Chenopodium quinoa HOM05D005187 ORTHO05D006321 4.4e-35 153.3 150 52.0
SalBow1G0530 Salvia bowleyana HOM05D005187 ORTHO05D006321 8.9e-28 129.0 110 66.4
Zm00001eb040420 Zea mays HOM05D005187 ORTHO05D006321 9.5e-22 109.0 102 56.9
COL.COLO4_23484 Corchorus olitorius HOM05D000076 ORTHO05D006537 1.1e-06 58.9 397 23.2
Potri.008G185200 Populus trichocarpa HOM05D000076 ORTHO05D006537 1.1e-06 58.9 407 22.1
Sabra08G0140300 Salix brachista HOM05D003359 ORTHO05D006537 1.1e-06 58.9 407 22.1
RcHm_v2.0_Chr5g0019611 Rosa chinensis HOM05D005187 ORTHO05D006321 3.3e-06 57.4 53 54.7
Hund25398 Selenicereus undatus HOM05D000076 ORTHO05D006537 7.3e-06 56.2 397 22.7
VMungo1383G2989 Vigna mungo HOM05D000076 ORTHO05D006537 7.3e-06 56.2 397 22.7
Gohir.A04G136900 Gossypium hirsutum HOM05D000076 ORTHO05D006537 9.6e-06 55.8 356 22.5


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