Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1419.1 719 100.0
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1335.5 719 94.4
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1300.4 722 91.0
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1289.2 722 89.8
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1275.8 725 89.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1243.0 723 86.6
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1229.2 723 86.0
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1221.8 722 85.7
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1215.3 722 85.9
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1213.4 724 85.1
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1213.0 726 85.3
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1212.2 724 85.2
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1212.2 724 85.2
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1194.1 722 84.5
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1192.6 730 83.4
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1188.7 722 84.3
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1168.3 743 80.9
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1152.5 725 82.5
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 0.0e+00 1099.7 728 76.0
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1090.9 719 79.1
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 2.5e-274 948.7 746 64.7
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 2.8e-273 945.3 747 64.9
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 2.0e-271 939.1 746 64.6
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 2.6e-271 938.7 746 64.5
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 5.8e-271 937.6 743 64.2
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 7.1e-269 930.6 747 63.5
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 1.9e-266 922.5 541 85.0
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.8e-264 916.0 759 62.8
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.0e-263 912.5 749 63.3
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.0e-263 912.5 746 63.5
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 4.5e-263 911.4 747 62.8
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.9e-262 908.7 744 62.4
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 3.8e-262 908.3 749 63.2
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 8.4e-262 907.1 741 62.5
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 1.9e-258 896.0 742 62.5
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 3.3e-258 895.2 742 62.3
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 7.4e-258 894.0 747 61.8
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.4e-256 889.8 740 61.2
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 2.0e-255 885.9 739 61.7
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 2.0e-255 885.9 746 61.1
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 4.5e-255 884.8 660 67.1
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 4.9e-254 881.3 741 61.4
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 2.7e-252 875.5 743 61.5
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.3e-251 873.2 746 60.7
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 5.6e-250 867.8 776 57.9
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 1.6e-249 866.3 744 59.7
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 2.1e-249 865.9 734 60.8
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.7e-249 865.1 748 60.0
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 8.2e-249 864.0 745 59.7
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 1.4e-248 863.2 745 61.6
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 2.4e-248 862.4 738 59.9
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 4.0e-248 861.7 749 59.8
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 1.2e-247 860.1 745 61.3
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 4.5e-247 858.2 744 60.9
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 4.5e-247 858.2 739 60.5
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 1.3e-246 856.7 744 60.9
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 4.9e-246 854.7 750 59.5
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 5.5e-245 851.3 744 59.0
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 1.6e-244 849.7 720 60.7
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 1.6e-244 849.7 739 60.4
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.5e-244 848.6 770 59.5
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 2.3e-243 845.9 745 59.3
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.1e-242 843.6 748 59.4
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 1.1e-242 843.6 747 58.5
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-241 840.1 775 57.3
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-241 840.1 777 57.5
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 2.8e-241 839.0 739 58.7
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 2.8e-241 839.0 746 58.6
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 6.3e-241 837.8 606 69.3
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.4e-240 836.6 744 58.9
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 3.1e-240 835.5 833 56.2
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 9.0e-240 833.9 778 56.9
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.5e-239 833.2 726 60.2
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 5.9e-239 831.2 749 58.6
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 8.5e-238 827.4 734 58.9
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 1.0e-235 820.5 771 57.2
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 8.2e-233 810.8 673 62.6
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 1.8e-232 809.7 801 55.2
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 4.1e-232 808.5 732 57.9
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.3e-230 803.5 672 61.8
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 7.2e-229 797.7 758 56.2
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 7.2e-229 797.7 670 62.1
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.6e-228 796.6 767 55.8
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.0e-227 793.9 744 56.9
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 5.7e-226 788.1 824 52.7
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 9.7e-226 787.3 669 61.6
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.8e-225 785.8 757 55.9
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 2.4e-224 782.7 662 61.5
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 2.2e-222 776.2 745 56.6
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 2.5e-213 746.1 669 58.0
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.7e-212 742.7 739 53.9
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 5.2e-211 738.4 696 57.0
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 3.5e-207 725.7 762 52.6
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 3.5e-207 725.7 661 57.8
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 1.0e-206 724.2 753 53.3
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 5.5e-205 718.4 809 50.4
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.3e-203 713.0 569 65.6
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 4.0e-203 712.2 654 57.2
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 5.7e-202 708.4 740 52.3
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.6e-194 682.9 737 51.2
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 6.3e-193 678.3 744 50.9
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 1.1e-189 667.5 728 49.9
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.8e-187 660.2 744 51.2
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 2.5e-181 639.8 617 55.6
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 2.4e-176 623.2 747 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 6.0e-175 618.6 781 47.1
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 1.3e-174 617.5 615 54.5
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 1.3e-166 590.9 579 54.1
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 2.4e-163 580.1 629 51.5
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 5.2e-163 578.9 744 46.6
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 3.8e-161 572.8 928 40.3
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 3.6e-156 556.2 596 49.5
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 3.4e-154 549.7 541 54.3
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 3.2e-152 543.1 609 49.3
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 3.8e-145 519.6 646 49.4
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 7.4e-133 478.8 530 50.0
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.1e-127 459.1 393 59.8
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 6.7e-110 402.5 393 52.7
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.5e-88 331.6 619 35.1
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.2e-88 330.5 339 53.4
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 8.3e-76 289.3 537 35.9
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 2.1e-71 274.6 252 55.2
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.4e-61 240.4 372 39.0
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-52 212.2 228 48.7
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-52 212.2 228 48.7
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 2.3e-49 201.4 577 29.6
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 1.1e-48 199.1 161 64.6
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 3.9e-41 174.1 102 87.3
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.1e-40 172.6 150 60.0
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 1.5e-37 162.2 162 53.1
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 3.2e-35 154.5 183 44.8
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 1.8e-33 148.7 77 89.6
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 3.0e-33 147.9 77 87.0
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 4.8e-31 140.6 77 84.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 2.1e-23 115.2 56 96.4
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 9.3e-19 99.8 191 42.4
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 1.2e-18 99.4 101 48.5
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 3.5e-18 97.8 168 40.5
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 3.7e-15 87.8 50 78.0
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 4.8e-15 87.4 66 75.8
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 4.8e-15 87.4 66 75.8
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 2.4e-14 85.1 62 59.7
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 7.6e-13 80.1 78 51.3
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 9.3e-11 73.2 93 48.4
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 5.7e-08 63.9 68 48.5
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 5.7e-08 63.9 56 57.1
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 1.6e-07 62.4 68 48.5


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