Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G04330 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 8.2e-114 413.7 203 100.0
AL3G14310 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 1.4e-89 333.2 203 83.3
AT3G04320 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 5.9e-88 327.8 201 82.6
AL3G14320 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 5.6e-86 321.2 205 82.4
Carub.0003s0353 Capsella rubella HOM05D008834 ORTHO05D011314 6.1e-85 317.8 202 80.2
CARHR078500 Cardamine hirsuta HOM05D008834 ORTHO05D011314 1.1e-78 297.0 201 74.6
BcaC04g23732 Brassica carinata HOM05D008834 ORTHO05D011314 3.9e-55 218.8 205 60.0
C09p05270 Brassica napus HOM05D008834 ORTHO05D011314 3.9e-55 218.8 205 60.0
BcaB04g19619 Brassica carinata HOM05D008834 ORTHO05D011314 2.1e-53 213.0 205 58.0
BolC9t53454H Brassica oleracea HOM05D008834 ORTHO05D011314 8.1e-53 211.1 204 58.3
A09p04880 Brassica napus HOM05D008834 ORTHO05D011314 3.4e-51 205.7 205 56.6
Sp2g30790 Schrenkiella parvula HOM05D008834 ORTHO05D011314 8.4e-50 201.1 193 57.0
BraA09t36125Z Brassica rapa HOM05D008834 ORTHO05D011314 5.4e-49 198.4 213 54.5
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 2.4e-44 183.0 206 53.9
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.2e-43 180.6 206 52.9
Thhalv10027937m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 1.2e-43 180.6 181 56.4
BcaB04g19618 Brassica carinata HOM05D008834 ORTHO05D011314 2.6e-43 179.5 197 52.8
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 5.8e-43 178.3 199 53.8
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.9e-42 176.0 206 52.4
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 2.9e-42 176.0 206 52.4
A09p14850 Brassica napus HOM05D008834 ORTHO05D011314 1.1e-20 104.4 175 43.4
BcaC04g22551 Brassica carinata HOM05D008834 ORTHO05D011314 4.1e-20 102.4 173 40.5
BolC9t54694H Brassica oleracea HOM05D008834 ORTHO05D011314 6.9e-20 101.7 174 40.2
Thhalv10023952m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 9.0e-20 101.3 122 52.5
C09p17980 Brassica napus HOM05D008834 ORTHO05D011314 3.4e-19 99.4 174 40.8
BraA09t37131Z Brassica rapa HOM05D008834 ORTHO05D011314 5.9e-19 98.6 181 42.0
A01p21740 Brassica napus HOM05D008834 ORTHO05D011314 6.1e-16 88.6 184 35.3
BraA01t02083Z Brassica rapa HOM05D008834 ORTHO05D011314 6.1e-16 88.6 184 35.3
BolC1t02656H Brassica oleracea HOM05D008834 ORTHO05D011314 7.4e-14 81.6 198 31.8
BcaC08g46552 Brassica carinata HOM05D008834 ORTHO05D011314 3.7e-13 79.3 171 34.5
BraA07t31310Z Brassica rapa HOM05D008834 ORTHO05D011314 1.4e-12 77.4 183 38.8
C09p17130 Brassica napus HOM05D008834 ORTHO05D011314 3.1e-12 76.3 161 38.5
BcaC04g22636 Brassica carinata HOM05D008834 ORTHO05D011314 1.2e-11 74.3 158 38.6
BolC9t54594H Brassica oleracea HOM05D008834 ORTHO05D011314 2.9e-10 69.7 165 33.9
BcaC09g50271 Brassica carinata HOM05D008834 ORTHO05D011314 7.2e-09 65.1 184 30.4
A08p31540 Brassica napus HOM05D008834 ORTHO05D040119 7.2e-09 65.1 159 30.8
BraA08t35076Z Brassica rapa HOM05D008834 ORTHO05D040119 7.2e-09 65.1 159 30.8
BcaC08g46549 Brassica carinata HOM05D008834 ORTHO05D011314 3.0e-07 59.7 122 39.3
CARHR165730 Cardamine hirsuta HOM05D020464 ORTHO05D023357 2.6e-06 56.6 162 27.8
C06p45230 Brassica napus HOM05D008834 ORTHO05D011314 3.3e-06 56.2 107 40.2


User provided reference genes

Program Settings