Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G03828 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 1.4e-37 159.1 79 100.0
AL3G13700 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 1.9e-26 122.1 79 83.5
Carub.0003s0302 Capsella rubella HOM05D010242 ORTHO05D010706 3.3e-18 94.7 84 65.5
CARHR077920 Cardamine hirsuta HOM05D010242 ORTHO05D010706 2.1e-12 75.5 79 51.9
Carub.0007s3156 Capsella rubella HOM05D010242 ORTHO05D010706 3.9e-11 71.2 80 50.0
AT3G03826 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 1.1e-10 69.7 77 50.6
Thhalv10022965m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 4.3e-10 67.8 77 54.5
Thhalv10023074m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 5.6e-10 67.4 77 49.4
AT5G43695 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 1.3e-09 66.2 77 51.9
BcaC01g04389 Brassica carinata HOM05D010242 ORTHO05D010706 2.1e-09 65.5 80 50.0
C03p40650 Brassica napus HOM05D010242 ORTHO05D010706 2.1e-09 65.5 80 50.0
BcaB04g19353 Brassica carinata HOM05D010242 ORTHO05D010706 6.2e-09 63.9 80 50.0
A03p33450 Brassica napus HOM05D010242 ORTHO05D010706 2.4e-08 62.0 80 48.8
BraA03t12520Z Brassica rapa HOM05D010242 ORTHO05D010706 2.4e-08 62.0 80 48.8
Carub.0002s0908 Capsella rubella HOM05D010242 ORTHO05D010706 9.0e-08 60.1 77 46.8
Carub.0003s2625 Capsella rubella HOM05D010242 ORTHO05D031466 9.0e-08 60.1 79 48.1
AL3G13690 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 2.0e-07 58.9 66 53.0
Thhalv10027499m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 2.0e-07 58.9 80 51.2
AT2G04622 Arabidopsis thaliana HOM05D010242 ORTHO05D031466 5.8e-07 57.4 79 46.8
AL8G16490 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 1.7e-06 55.8 75 46.7
Carub.0003s0301 Capsella rubella HOM05D010242 ORTHO05D010706 4.9e-06 54.3 80 43.8
Thhalv10022409m.g Eutrema salsugineum HOM05D010103 ORTHO05D010706 8.4e-06 53.5 81 44.4


User provided reference genes

Program Settings