Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G03826 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 2.9e-35 151.4 76 100.0
AL3G13690 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 6.2e-22 107.1 70 82.9
Carub.0003s0301 Capsella rubella HOM05D010242 ORTHO05D010706 1.4e-18 95.9 78 69.2
Carub.0007s3156 Capsella rubella HOM05D010242 ORTHO05D010706 6.0e-17 90.5 78 66.7
Carub.0002s0908 Capsella rubella HOM05D010242 ORTHO05D010706 1.5e-15 85.9 76 55.3
Thhalv10023074m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 7.3e-15 83.6 77 55.8
CARHR077920 Cardamine hirsuta HOM05D010242 ORTHO05D010706 6.2e-14 80.5 76 52.6
Thhalv10022409m.g Eutrema salsugineum HOM05D010103 ORTHO05D010706 1.1e-13 79.7 78 56.4
AT5G43695 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 5.2e-13 77.4 76 57.9
AL3G13700 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 8.9e-13 76.6 76 52.6
Thhalv10027499m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 1.2e-12 76.3 79 51.9
BcaC01g04389 Brassica carinata HOM05D010242 ORTHO05D010706 1.5e-12 75.9 77 49.4
C03p40650 Brassica napus HOM05D010242 ORTHO05D010706 1.5e-12 75.9 77 49.4
A07p20010 Brassica napus HOM05D014409 ORTHO05D010706 2.0e-12 75.5 78 53.8
C06p18550 Brassica napus HOM05D014409 ORTHO05D010706 2.0e-12 75.5 78 53.8
BraA07t29699Z Brassica rapa HOM05D014409 ORTHO05D010706 2.0e-12 75.5 78 53.8
A03p33450 Brassica napus HOM05D010242 ORTHO05D010706 3.4e-12 74.7 77 49.4
BraA03t12520Z Brassica rapa HOM05D010242 ORTHO05D010706 3.4e-12 74.7 77 49.4
A01p16770 Brassica napus HOM05D014409 ORTHO05D010706 1.3e-11 72.8 78 52.6
BraA01t01630Z Brassica rapa HOM05D014409 ORTHO05D010706 1.3e-11 72.8 78 52.6
Carub.0003s0302 Capsella rubella HOM05D010242 ORTHO05D010706 1.9e-10 68.9 81 46.9
BcaB04g19353 Brassica carinata HOM05D010242 ORTHO05D010706 2.4e-10 68.6 70 44.3
AL8G16630 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 4.1e-10 67.8 59 54.2
AT3G03828 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 4.1e-10 67.8 77 50.6
BolC6t37068H Brassica oleracea HOM05D014409 ORTHO05D010706 4.1e-10 67.8 61 52.5
AL8G16490 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 9.2e-10 66.6 73 50.7
Thhalv10022965m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 1.3e-08 62.8 77 48.1
AT2G04622 Arabidopsis thaliana HOM05D010242 ORTHO05D031466 5.1e-08 60.8 76 48.7
Carub.0003s2625 Capsella rubella HOM05D010242 ORTHO05D031466 1.5e-07 59.3 79 43.0
C05p63150 Brassica napus HOM05D010103 ORTHO05D010706 5.6e-07 57.4 77 50.6
A05p43550 Brassica napus HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 48.0
A05p43560 Brassica napus HOM05D010103 ORTHO05D010706 1.6e-06 55.8 77 50.6
C05p63140 Brassica napus HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 48.0
BolC5t34976H Brassica oleracea HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 48.0
BolC5t34977H Brassica oleracea HOM05D010103 ORTHO05D010706 1.6e-06 55.8 78 52.6
BraA05t23095Z Brassica rapa HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 48.0
BraA05t23096Z Brassica rapa HOM05D010103 ORTHO05D010706 1.6e-06 55.8 77 50.6
Carub.0003s2624 Capsella rubella HOM05D010242 ORTHO05D031466 1.6e-06 55.8 81 44.4


User provided reference genes

Program Settings