Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G03776 Arabidopsis thaliana HOM05D015281 ORTHO05D017419 1.8e-76 289.3 157 100.0
AL3G13600 Arabidopsis lyrata HOM05D015281 ORTHO05D017419 1.0e-55 220.3 154 72.1
AL1G50480 Arabidopsis lyrata HOM05D015281 ORTHO05D017419 9.4e-41 170.6 158 60.1
CARHR034380 Cardamine hirsuta HOM05D015281 ORTHO05D017419 2.8e-37 159.1 159 57.9
Carub.0001s3320 Capsella rubella HOM05D015281 ORTHO05D017419 4.4e-30 135.2 159 54.7
Sp7g28390 Schrenkiella parvula HOM05D015281 ORTHO05D017419 3.5e-27 125.6 160 53.1
A08p33750 Brassica napus HOM05D000178 ORTHO05D011115 5.2e-23 111.7 157 46.5
Carub.0001s3319 Capsella rubella HOM05D015281 ORTHO05D017419 1.4e-20 103.6 104 54.8
BraA08t35291Z Brassica rapa HOM05D000178 ORTHO05D011115 7.0e-20 101.3 157 43.3
Thhalv10027550m.g Eutrema salsugineum HOM05D015281 ORTHO05D017419 6.1e-16 88.2 171 50.3
C08p14020 Brassica napus HOM05D000178 ORTHO05D011115 3.3e-09 65.9 158 39.2
BolC8t49038H Brassica oleracea HOM05D000178 ORTHO05D011115 3.3e-09 65.9 158 39.2
BcaC07g38596 Brassica carinata HOM05D014980 ORTHO05D011115 2.8e-08 62.8 158 38.6
THA.LOC104825137 Tarenaya hassleriana HOM05D015281 ORTHO05D017419 3.6e-08 62.4 156 32.7
Atru.chr9.2110 Acer truncatum HOM05D009668 ORTHO05D009578 4.7e-08 62.0 159 34.6
Ciclev10007119m.g Citrus clementina HOM05D009668 ORTHO05D009578 2.3e-07 59.7 162 32.7
Atru.chr1.58 Acer truncatum HOM05D009668 ORTHO05D009578 4.4e-06 55.5 159 32.7


User provided reference genes

Program Settings