Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.1e-36 156.0 73 100.0
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.1e-36 156.0 73 100.0
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.1e-36 156.0 73 100.0
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.1e-36 156.0 73 100.0
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 98.6
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 97.3
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 3.2e-36 154.5 73 97.3
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 3.2e-36 154.5 73 97.3
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 3.2e-36 154.5 73 97.3
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 3.2e-36 154.5 73 97.3
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 3.2e-36 154.5 73 97.3
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.2e-35 152.5 73 97.3
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 4.7e-35 150.6 73 94.5
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 4.7e-35 150.6 73 95.9
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.0e-34 147.5 73 97.3
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 1.7e-32 142.1 73 90.4
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.6e-30 135.6 72 86.1
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.0e-30 135.2 72 84.7
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.7e-30 134.8 72 83.3
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 4.5e-30 134.0 71 85.9
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.7e-30 133.3 71 84.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.9e-29 131.3 73 80.8
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 5.0e-29 130.6 71 83.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 1.1e-28 129.4 72 81.9
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.5e-28 128.3 72 80.6
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 2.5e-28 128.3 72 77.8
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 2.5e-28 128.3 72 77.8
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 2.5e-28 128.3 72 77.8
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 4.2e-28 127.5 71 78.9
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 5.5e-28 127.1 72 75.0
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 79.2
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 7.2e-28 126.7 70 82.9
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 76.4
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 80.6
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 9.4e-28 126.3 72 80.6
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 9.4e-28 126.3 72 73.6
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 9.4e-28 126.3 72 73.6
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 73.6
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.1e-27 125.2 71 80.3
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 2.1e-27 125.2 73 75.3
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 2.1e-27 125.2 71 77.5
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 79.2
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 79.2
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 2.7e-27 124.8 72 77.8
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 3.6e-27 124.4 72 72.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 3.6e-27 124.4 72 75.0
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 4.7e-27 124.0 73 75.3
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 4.7e-27 124.0 71 76.1
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 4.7e-27 124.0 73 78.1
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 8.0e-27 123.2 72 77.8
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 8.0e-27 123.2 72 73.6
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 8.0e-27 123.2 69 79.7
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.0e-26 122.9 67 82.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.0e-26 122.9 72 73.6
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.0e-26 122.9 72 75.0
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.0e-26 122.9 72 76.4
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 1.4e-26 122.5 72 76.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 81.2
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 83.3
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 83.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 83.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 76.4
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.3e-26 121.7 72 75.0
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 2.3e-26 121.7 72 73.6
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 3.0e-26 121.3 71 78.9
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 4.0e-26 120.9 72 73.6
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.2e-26 120.6 71 73.2
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 5.2e-26 120.6 72 72.2
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 6.8e-26 120.2 71 78.9
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 6.8e-26 120.2 72 73.6
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 8.8e-26 119.8 72 72.2
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 8.8e-26 119.8 72 75.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 8.8e-26 119.8 72 75.0
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 70.8
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 71 71.8
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 78.3
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 71 73.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 75.0
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.5e-25 119.0 71 74.6
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 70.8
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.0e-25 118.6 69 75.4
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 70.8
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 4.4e-25 117.5 72 70.8
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.4e-25 117.5 72 69.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 4.4e-25 117.5 72 72.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 9.8e-25 116.3 66 80.3
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 9.8e-25 116.3 73 69.9
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 9.8e-25 116.3 71 73.2
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 72.5
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 72.5
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.1e-23 112.8 72 65.3
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.4e-23 112.5 62 80.6
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 9.1e-23 109.8 58 82.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.0e-22 108.6 72 62.5
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.7e-22 108.2 61 75.4
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 65.3
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.5e-22 107.5 65 67.7
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.5e-22 107.5 65 67.7
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.3e-21 105.9 72 65.3
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.8e-21 104.4 72 61.1
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.8e-21 104.4 72 61.1
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.0e-21 104.0 61 73.8
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.6e-21 103.2 72 61.1
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.1e-20 102.8 72 61.1
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.1e-20 102.8 72 61.1
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.5e-20 101.7 72 59.7
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 3.3e-20 101.3 64 71.9
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.5e-20 100.5 72 58.3
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.5e-20 100.5 72 56.9
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.6e-19 99.0 72 61.1
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.8e-19 98.2 69 58.0
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.0e-18 96.3 69 56.5
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.0e-17 92.0 70 54.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.6e-17 91.7 49 83.7
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 5.7e-17 90.5 61 63.9
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.3e-16 86.7 48 81.2
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.6e-14 82.4 58 63.8
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 3.7e-08 61.2 70 44.3
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.0e-06 55.5 70 35.7
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.5e-06 54.7 69 42.0
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.6e-06 54.3 71 36.6


User provided reference genes

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